Job Description P52647 Confidence 99.38% Date Thu Jan 5 12:05:59 GMT 2012 Rank 48 Aligned Residues 203 % Identity 13% Template d2ez9a3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 1.60

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		827	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	K	L	L	T	Q	L	Y	G	D	R	M	L	I	A	N	A	T	G	C	S	S	I	Y	G	G	N	L	P	S	T	P	Y	T	T	D	A	N	G	R	G	P	A	W	A	N	S	L	F	E	D	N	A	E	F	G	L	G	F	R	L	T	V	D	Q	H	R	V	R	V	L	R	L	L	D	Q	F	A	D
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	L	R	A	V	N	K	I	A	E	P	D	A	I	Y	S	I	D	V	G	D	I	N	L	N	A	N	R	H	L	K	L	T	P	S	N	.	.	.	.	.	.	.	R	H	I	T	S	N	L	F	A	T	M	G	V	G	I	P	G	A	I	A	A	K	L	N	Y	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T							S	S														T	T		.	.	.	.	.	.	.							S	S			T	T														T	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																						.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.								.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
		907	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	P	A	E	L	L	T	A	L	K	S	D	A	T	P	E	V	R	R	E	Q	V	A	A	L	R	Q	Q	L	N	D	V	A	E	A	H	E	L	L	R	D	A	D	A	L	V	E	K	S	I	W	L	I	G	G	D	G	W	A	Y	D	I	G	F	G	G	L	D	H	V	L	S	L	T	E	N	V	N	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	R	Q	V	F	N	L	A	G	D	G	.	G	A	S	M	T	M	Q	D	L	A	T	Q	V	Q	Y	H	L	P	V	I	N
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S										.						G	G	G							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.
Template SS confidence
																																																	438	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
		987	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.			.	.	.	.	1060	.	.	.	.
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		L	V	L	D	T	Q	C	Y	S	N	T	G	G	Q	A	S	K	A	T	P	L	G	A	V	T	K	F	G	E	H	G	K	R	K	A	R	K	D	L	G	V	S	M	M	M	Y	G	H	V	Y	V	A	Q	I	S	L	G	A	Q	L	N	Q	T	V	K	A	I	Q	E	.	.	A	E	A	Y	P	G	P	S	L
Query Conservation																																																																							.	.
Alig confidence																												.	.	.	.	.	.																				.	.	.			.													.	.
Template Conservation																												.	.	.	.	.	.																				.	.	.			.
Template Sequence		V	V	F	T	N	C	Q	Y	G	W	I	K	D	E	Q	E	D	T	N	Q	N	D	F	I	G	V	.	.	.	.	.	.	E	F	N	D	I	D	F	S	K	I	A	D	G	V	H	M	Q	A	F	.	.	.	R	V	.	N	K	I	E	Q	L	P	D	V	F	E	Q	A	K	A	I	A	Q	H	E	P	V	L
Template Known Secondary structure							S	B													S	S				S	S	.	.	.	.	.	.	B													T	T					.	.	.			.		B	G	G	G												T	T	T	S
Template Predicted Secondary structure																												.	.	.	.	.	.																				.	.	.			.
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.							.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.				.	.		.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.
		1065	.	.	.	.						1070	.	.	.	.						.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130
Predicted Secondary structure							.	.	.	.	.						.	.	.	.	.
Query SS confidence							.	.	.	.	.						.	.	.	.	.
Query Sequence		I	I	A	Y	S	.	.	.	.	.	P	C	E	E	H	.	.	.	.	.	G	Y	D	L	A	L	S	H	D	Q	M	R	Q	L	T	A	T	G	F	W	P	L	Y	R	F	D	P	R	R	A	D	E	G	K	L	P	L	A	L	D	S	R	P	P	S	E	A	P	E	E	T	L	L	H	E	Q
Query Conservation							.	.	.	.	.						.	.	.	.	.
Alig confidence							.	.	.	.	.						.	.	.	.	.																	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	A	V	I	T	G	D	R	P	L	P	A	E	K	L	R	L	D	S	A	M	S	S	A	A	D	I	E	A	F	K	Q	R	Y	E	.	.	.	A	Q	D	L	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	S	T	Y	L	K	Q	F	G
Template Known Secondary structure														T	T	S					T	T	T	S													T	.	.	.		T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T
Template Predicted Secondary structure																																						.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.				.	.	.	.	580																							.	.	.	.	.	.	.	.	.	590

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions