Job Description P52647 Confidence 100.00% Date Thu Jan 5 12:05:59 GMT 2012 Rank 2 Aligned Residues 375 % Identity 46% Template d2c42a2 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) PFOR PP module Resolution 1.78

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		793	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	R	S	K	L	E	R	I	D	I	R	T	S	Q	L	I	T	P	L	F	E	Y	S	G	A	C	S	G	C	G	E	T	P	Y	I	K	L	L	T	Q	L	Y	G	D	R	M	L	I	A	N	A	T	G	C	S	S	I	Y	G	G	N	L	P	S	T	P	Y	T	T	D	A	N	G	R	G	P	A	W	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	S	E	V	L	P	R	D	S	L	K	G	S	Q	F	Q	E	P	L	M	E	F	S	G	A	C	S	G	C	G	E	T	P	Y	V	R	V	I	T	Q	L	F	G	E	R	M	F	I	A	N	A	T	G	C	S	S	I	W	G	A	S	A	P	S	M	P	Y	K	T	N	R	L	G	Q	G	P	A	W	G
Template Known Secondary structure				T	T	S	S		T	T	S					T	T	S			S	B		S		S			T	T		S	S												G	G	G							S	S									T	T				B				T	T	S
Template Predicted Secondary structure
Template SS confidence
		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.
		873	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.		.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.							.	.	.	940	.	.	.	.	.
Predicted Secondary structure																																					.																														.	.	.	.	.	.
Query SS confidence																																					.																														.	.	.	.	.	.
Query Sequence		N	S	L	F	E	D	N	A	E	F	G	L	G	F	R	L	T	V	D	Q	H	R	V	R	V	L	R	L	L	D	Q	F	A	D	K	.	I	P	A	E	L	L	T	A	L	K	S	D	A	T	P	E	V	R	R	E	Q	V	A	A	L	R	Q	Q	L	.	.	.	.	.	.	N	D	V	A	E	A	H	E	L
Query Conservation																																					.																														.	.	.	.	.	.
Alig confidence																																					.																														.	.	.	.	.	.
Template Conservation
Template Sequence		N	S	L	F	E	D	A	A	E	Y	G	F	G	M	N	M	S	M	F	A	R	R	T	H	L	A	D	L	A	A	K	A	L	E	S	D	A	S	G	D	V	K	E	A	L	Q	G	W	L	A	G	K	N	D	P	I	K	S	K	E	Y	G	D	K	L	K	K	L	L	A	G	Q	K	D	G	L	L	G	Q	I
Template Known Secondary structure					S	T	T																												T	T	T																T	T	S															T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		866	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.
		946	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	D	A	D	A	L	V	E	K	S	I	W	L	I	G	G	D	G	W	A	Y	D	I	G	F	G	G	L	D	H	V	L	S	L	T	E	N	V	N	I	L	V	L	D	T	Q	C	Y	S	N	T	G	G	Q	A	S	K	A	T	P	L	G	A	V	T	K	F	G	E	H	G	K	R	K	A	R	K	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	M	S	D	L	Y	T	K	K	S	V	W	I	F	G	G	D	G	W	A	Y	D	I	G	Y	G	G	L	D	H	V	L	A	S	G	E	D	V	N	V	F	V	M	D	T	E	V	Y	S	N	T	G	G	Q	S	S	K	A	T	P	T	G	A	V	A	K	F	A	A	A	G	K	R	T	G	K	K	D	L
Template Known Secondary structure			T	T	G	G	G	T	S															T	T	T										T	T		S									S	S	B	T	T	T	T		B			T	T	S		T	T			B	B	T	B	T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		946	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.
		1026	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.			.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.
Predicted Secondary structure																																																	.	.
Query SS confidence																																																	.	.
Query Sequence		G	V	S	M	M	M	Y	G	H	V	Y	V	A	Q	I	S	L	G	A	Q	L	N	Q	T	V	K	A	I	Q	E	A	E	A	Y	P	G	P	S	L	I	I	A	Y	S	P	C	E	.	.	E	H	G	Y	D	L	A	L	S	H	D	Q	M	R	Q	L	T	A	T	G	F	W	P	L	Y	R	F	D	P	R	R
Query Conservation																																																	.	.
Alig confidence																																																	.	.
Template Conservation
Template Sequence		A	R	M	V	M	T	Y	G	Y	V	Y	V	A	T	V	S	M	G	Y	S	K	Q	Q	F	L	K	V	L	K	E	A	E	S	F	P	G	P	S	L	V	I	A	Y	A	T	C	I	N	Q	G	L	R	K	G	M	G	K	S	Q	D	V	M	N	T	A	V	K	S	G	Y	W	P	L	F	R	Y	D	P	R	L
Template Known Secondary structure							T	T	S	S	S							T	T	T															S	S	S											G	G	G		B	T	T		G	G	G											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		1026	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.
		1104	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	E	G	K	L	P	L	A	L	D	S	R	P	P	S	E	A	P	E	E	T	L	L	H	E	Q	R	F	R	R	L	N	S	Q	Q	P	E	V	A	E	Q	L	W	K	D	A	A	A	D	L	Q	K	R	Y	D	F	L	A	Q	M	A	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	Q	G	K	N	P	F	Q	L	D	S	K	A	P	D	G	S	V	E	E	F	L	M	A	Q	N	R	F	A	V	L	D	R	S	F	P	E	D	A	K	R	L	R	A	Q	V	A	H	E	L	D	V	R	F	K	E	L	E	H	M	A	A	T
Template Known Secondary structure				T	T	S		S					S		S			S								T	B
Template Predicted Secondary structure
Template SS confidence
		1106	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions