Job Description P52647 Confidence 98.00% Date Thu Jan 5 12:05:59 GMT 2012 Rank 136 Aligned Residues 192 % Identity 20% Template d2bfda1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.39

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		843	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	T	G	C	S	S	I	Y	G	G	N	L	P	S	T	P	Y	T	T	D	A	N	G	R	G	P	A	W	A	N	S	L	F	E	D	N	A	E	F	G	L	G	F	R	L	T	V	D	Q	H	R	V	R	V	L	R	L	L	D	Q	F	A	D	K	I	P	A	E	L	L	T	A	L	K	S	D	A	T	P
Query Conservation
Alig confidence																						.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	I	S	D	L	G	K	G	R	Q	M	P	V	H	Y	G	C	K	E	R	.	.	.	.	.	H	F	V	T	I	S	S	P	L	A	T	Q	I	P	Q	A	V	G	A	A	Y	A	A	K	R	A	N	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T		T	T	T	T		S		S	S				B	T	T	T	.	.	.	.	.	T	B					S	S	T	T	T																T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		923	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.		.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		E	V	R	R	E	Q	V	A	A	L	R	Q	Q	L	N	D	V	A	E	A	H	E	L	L	R	D	A	D	A	L	V	E	K	S	I	W	L	I	G	G	D	G	W	A	Y	D	I	G	F	.	G	G	L	D	H	V	L	S	L	T	E	N	V	N	I	L	V	L	D	T	Q	C	Y	S	N	T	G	G	Q	A
Query Conservation																																																			.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																						.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	V	V	I	C	Y	F	G	E	G	A	A	S	E	G	D	A	H	A	G	F	N	F	A	A	T	L	E	C	P	I	I	F	F	C	R	N	N	G	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	G	G	G	S													T	T											S	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.
Template SS confidence
																																	184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		1002	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.					1060	.	.	.	.	.	.	.	.	.	1070	.	.		.	.	.	.
Predicted Secondary structure																																																												.	.	.	.														.
Query SS confidence																																																												.	.	.	.														.
Query Sequence		S	K	A	T	P	L	G	A	V	T	K	F	G	E	H	G	K	R	K	A	R	K	D	L	G	V	S	M	M	M	Y	G	H	V	Y	V	A	Q	I	S	L	G	A	Q	L	N	Q	T	V	K	A	I	Q	E	A	E	A	Y	.	.	.	.	P	G	P	S	L	I	I	A	Y	S	P	C	E	.	E	H	G	Y
Query Conservation																																																												.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.																													.				.																		.	.	.	.														.			.	.
Template Conservation		.	.	.	.	.	.	.	.																													.				.																																						.	.
Template Sequence		.	.	.	.	.	.	.	.	Y	A	I	S	T	P	T	S	E	Q	Y	R	G	D	G	I	A	A	R	G	P	G	Y	G	I	M	S	I	.	R	V	D	.	G	N	D	V	F	A	V	Y	N	A	T	K	E	A	R	R	R	A	V	A	E	N	Q	P	F	L	I	E	A	M	T	Y	R	I	G	S	T	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.			T	T			G	G	G	T		S	S	S	T	T	G	G	G	T	G	G	G	T					.				.	T	T																				T																.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																													.				.																																						.	.
Template SS confidence
										224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
		1077	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	A	L	S	H	D	Q	M	R	Q	L	T	A	T	G	F	W	P	L	Y	R	F	D	P	R	R	A	D	E	G	K	L	P	L	A	L	D	S	R	P	P	S	E	A	P	E	E	T	L	L	H	E	Q	R	F	R	R	L	N	S	Q	Q	P	E	V	A	E	Q	L	W	K	D	A	A	A	D	L	Q	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	H	P	I	S	R	L	R	H	Y	L	L	S	Q	G	W	.	.	.	.	.	.	W	D	E	E	Q	E	K	A	W	R	K	Q	S	R	R	K	V	M	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	T	T		.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.
Template SS confidence
																																									313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.							.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		1157	.	.	1160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	D	F	L	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	E	Q	A	E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		348	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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