Job Description P52647 Confidence 97.68% Date Thu Jan 5 12:05:59 GMT 2012 Rank 145 Aligned Residues 190 % Identity 15% Template d1w85a_ SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 2.0

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		865	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	R	G	P	A	W	A	N	S	L	F	E	D	N	A	E	F	G	L	G	F	R	L	T	V	D	Q	H	R	V	R	V	L	R	L	L	D	Q	F	A	D	K	I	P	A	E	L	L	T	A	L	K	S	D	A	T	P	E	V	R	R	E	Q	V	A	A	L	R	Q	Q	L	N	D	V	A	E	A	H	E
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	V	N	V	L	P	P	Q	I	I	I	G	A	Q	Y	I	Q	A	A	G	V	A	L	G	L	K	M	R	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T			B						S	T	T																T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		945	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.		.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		L	L	R	D	A	D	A	L	V	E	K	S	I	W	L	I	G	G	D	G	W	A	Y	D	I	G	F	.	G	G	L	D	H	V	L	S	L	T	E	N	V	N	I	L	V	L	D	T	Q	C	Y	S	N	T	G	G	Q	A	S	K	A	T	P	L	G	A	V	T	K	F	G	E	H	G	K	R	K	A	R	K
Query Conservation																													.
Alig confidence		.	.	.	.	.	.	.	.	.																			.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	K	A	V	A	I	T	Y	T	G	D	G	G	T	S	Q	G	D	F	Y	E	G	I	N	F	A	G	A	F	K	A	P	A	I	F	V	V	Q	N	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	I	S	T	P	V	E	K	Q	T	V	A	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	S									T	G	G	G	G	S													T	T											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T			G	G	G	T		S		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
											164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.																		.	.	.	.	.	.	210	.	.	.	.	.	.	.
		1024	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.					1060	.	.	.	.	.	.	.	.	.	1070	.	.		.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.														.
Query SS confidence																																						.	.	.	.														.
Query Sequence		D	L	G	V	S	M	M	M	Y	G	H	V	Y	V	A	Q	I	S	L	G	A	Q	L	N	Q	T	V	K	A	I	Q	E	A	E	A	Y	.	.	.	.	P	G	P	S	L	I	I	A	Y	S	P	C	E	.	E	H	G	Y	D	L	A	L	S	H	D	Q	M	R	Q	L	T	A	T	G	F	W	P	L	Y	R
Query Conservation																																						.	.	.	.														.
Alig confidence																.	.																					.	.	.	.														.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	L	A	Q	K	A	V	A	A	G	I	P	G	I	.	.	Q	V	D	G	M	D	P	L	A	V	Y	A	A	V	K	A	A	R	E	R	A	I	N	G	E	G	P	T	L	I	E	T	L	C	F	R	Y	G	P	H	T	M	S	G	D	S	K	E	L	E	N	E	W	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	G	G	G	G	G	G	T	T					.	.				T	T																		T	T	S												S	S		S		S	S											.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.																																																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		1099	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	D	P	R	R	A	D	E	G	K	L	P	L	A	L	D	S	R	P	P	S	E	A	P	E	E	T	L	L	H	E	Q	R	F	R	R	L	N	S	Q	Q	P	E	V	A	E	Q	L	W	K	D	A	A	A	D	L	Q	K	R	Y	D	F	L	A	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	K	K	D	P	L	V	R	F	R	K	F	L	E	A	K	G	L	W	.	.	.	.	.	.	S	E	E	E	E	N	N	V	I	E	Q	A	K	E	E	I	K	E	A	I	K	K	A	D	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T													T	T			.	.	.	.	.	.																									T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template SS confidence
																	291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.							310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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