Job Description P52647 Confidence 98.22% Date Thu Jan 5 12:05:59 GMT 2012 Rank 130 Aligned Residues 217 % Identity 18% Template d1umda_ SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Branched-chain alpha-keto acid dehydrogenase PP module Resolution 1.90

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		826	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	I	K	L	L	T	Q	L	Y	G	D	R	M	L	I	A	N	A	T	G	C	S	S	I	Y	G	G	N	L	P	S	T	P	Y	T	T	D	A	N	G	R	G	P	A	W	A	N	S	L	F	E	D	N	A	E	F	G	L	G	F	R	L	T	V	D	Q	H	R	V	R	V	L	R	L	L	D	Q	F	A
Query Conservation
Alig confidence														.	.	.	.	.	.																				.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.																				.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template Sequence		P	L	K	E	L	L	G	Q	M	L	A	T	.	.	.	.	.	.	K	A	D	P	N	K	G	R	Q	M	P	E	H	P	G	S	K	A	L	.	.	.	.	.	N	F	F	T	V	A	S	P	I	A	S	H	V	P	P	A	A	G	A	A	I	S	M	K	L	L	R	T	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	B	.	.	.	.	.	.	T	T		T	T	T	T		S		S	S				B	T	T	T	.	.	.	.	.	T	B					S	S	T	T	T	T														T	T		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.																				.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.						.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		906	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.		.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.
Predicted Secondary structure																																																															.
Query SS confidence																																																															.
Query Sequence		D	K	I	P	A	E	L	L	T	A	L	K	S	D	A	T	P	E	V	R	R	E	Q	V	A	A	L	R	Q	Q	L	N	D	V	A	E	A	H	E	L	L	R	D	A	D	A	L	V	E	K	S	I	W	L	I	G	G	D	G	W	A	.	Y	D	I	G	F	G	G	L	D	H	V	L	S	L	T	E	N	V
Query Conservation																																																															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	V	A	V	C	T	F	G	D	G	A	T	S	E	G	D	W	Y	A	G	I	N	F	A	A	V	Q	G	A	P	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	G	G	G	G	S													T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																																		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.					1060
Predicted Secondary structure																																																																													.	.	.	.
Query SS confidence																																																																													.	.	.	.
Query Sequence		N	I	L	V	L	D	T	Q	C	Y	S	N	T	G	G	Q	A	S	K	A	T	P	L	G	A	V	T	K	F	G	E	H	G	K	R	K	A	R	K	D	L	G	V	S	M	M	M	Y	G	H	V	Y	V	A	Q	I	S	L	G	A	Q	L	N	Q	T	V	K	A	I	Q	E	A	E	A	Y	.	.	.	.	P
Query Conservation																																																																													.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																					.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template Sequence		V	F	I	A	E	N	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	Y	A	I	S	V	D	Y	R	H	Q	T	H	S	P	T	I	A	D	K	A	H	A	F	G	I	P	G	Y	.	.	L	V	D	G	M	D	V	L	A	S	Y	Y	V	V	K	E	A	V	E	R	A	R	R	G	E
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			T	T								S	S	S		S	G	G	G	G	G	G	T	T	S				.	.				T	T																		T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.
Template SS confidence
		198	.	200	.	.	.	.																		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		1061	.	.	.	.	.	.	.	.	1070	.	.		.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130			.	.	.		.	.	.
Predicted Secondary structure														.																																																											.	.				.
Query SS confidence														.																																																											.	.				.
Query Sequence		G	P	S	L	I	I	A	Y	S	P	C	E	.	E	H	G	Y	D	L	A	L	S	H	D	Q	M	R	Q	L	T	A	T	G	F	W	P	L	Y	R	F	D	P	R	R	A	D	E	G	K	L	P	L	A	L	D	S	R	P	P	S	E	A	P	E	E	T	L	L	H	E	Q	.	.	R	F	R	.	R	L	N
Query Conservation														.																																																											.	.				.
Alig confidence														.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.				.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	S	L	V	E	L	R	V	Y	R	Y	G	P	H	S	S	A	D	D	D	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	R	P	K	E	E	V	A	F	W	R	K	K	D	P	I	P	R	F	R	R	F	L	E
Template Known Secondary structure														S		S	S	T	T			G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S										T	T
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.																																		.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		1137	.				.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		S	Q	.	.	.	Q	P	E	V	A	E	Q	L	W	K	D	A	A	A	D	L	Q	K	R	Y	D	F	L	A	Q
Query Conservation				.	.	.
Alig confidence				.	.	.
Template Conservation
Template Sequence		A	R	G	L	W	N	E	E	W	E	E	D	V	R	E	E	I	R	A	E	L	E	R	G	L	K	E	A	E	E
Template Known Secondary structure		T	T	T
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions