Job Description P52647 Confidence 99.23% Date Thu Jan 5 12:05:59 GMT 2012 Rank 53 Aligned Residues 168 % Identity 15% Template d1t9ba3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 2.20

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		827	.	.	830	.	.	.	.	.	.	.				.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		Y	I	K	L	L	T	Q	L	Y	G	D	.	.	.	R	M	L	I	A	N	A	T	G	C	S	S	I	Y	G	G	N	L	P	S	T	P	Y	T	T	D	A	N	G	R	G	P	A	W	A	N	S	L	F	E	D	N	A	E	F	G	L	G	F	R	L	T	V	D	Q	H	R	V	R	V	L	R	L	L	D	Q
Query Conservation													.	.	.
Alig confidence													.	.	.																										.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		V	I	K	K	L	S	K	V	A	N	D	T	G	R	H	V	I	V	T	T	G	V	G	Q	H	Q	M	W	A	A	Q	H	W	T	W	R	N	P	H	.	.	.	.	.	.	.	T	F	I	T	S	G	G	L	G	T	M	G	Y	G	L	P	A	A	I	G	A	Q	V	A	K	P	.	.	.	.	.	.	.	.
Template Known Secondary structure												T	T		S								S	S										S				S	T	T	.	.	.	.	.	.	.							S	S			T	T														T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																									.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.								.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
		904	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	D	K	I	P	A	E	L	L	T	A	L	K	S	D	A	T	P	E	V	R	R	E	Q	V	A	A	L	R	Q	Q	L	N	D	V	A	E	A	H	E	L	L	R	D	A	D	A	L	V	E	K	S	I	W	L	I	G	G	D	G	W	A	Y	D	I	G	F	G	G	L	D	H	V	L	S	L	T	E	N
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	S	L	V	I	D	I	D	G	D	A	S	F	N	.	M	T	L	T	E	L	S	S	A	V	Q	A	G	T	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S													.			G	G	G								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
																																																				541	.	.	.	.	.	.	.	.	550	.	.	.	.		.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
		984	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	I	L	V	L	D	T	Q	C	Y	S	N	T	G	G	Q	A	S	K	A	T	P	L	G	A	V	T	K	F	G	E	H	G	K	R	K	A	R	K	D	L	G	V	S	M	M	M	Y	G	H	V	Y	V	A	Q	I	S	L	G	A	Q	L	N	Q	T	V	K	A	I	Q	E	A	E	A	Y	P	G	P	S
Query Conservation
Alig confidence																										.	.	.	.	.	.																									.	.	.			.
Template Conservation																										.	.	.	.	.	.																									.	.	.			.
Template Sequence		V	K	I	L	I	L	N	N	E	E	Q	G	M	V	T	Q	W	Q	S	L	F	Y	E	H	.	.	.	.	.	.	R	Y	S	H	T	H	Q	L	N	P	D	F	I	K	L	A	E	A	M	G	L	K	G	L	.	.	.	R	V	.	K	K	Q	E	E	L	D	A	K	L	K	E	F	V	S	T	K	G	P	V
Template Known Secondary structure										S	S												S	T	T	.	.	.	.	.	.				S															T	T					.	.	.			.		S															S	S
Template Predicted Secondary structure																										.	.	.	.	.	.																									.	.	.			.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.							.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.				.	.		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
		1064	.	.	.	.	.	1070
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	I	A	Y	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	E	V	E	V	D
Template Known Secondary structure							B
Template Predicted Secondary structure
Template SS confidence
		640	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions