Job Description P52647 Confidence 98.84% Date Thu Jan 5 12:05:59 GMT 2012 Rank 84 Aligned Residues 166 % Identity 17% Template d1pvda3 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) Pyruvate oxidase and decarboxylase PP module Resolution 2.30

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		828	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.				.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		I	K	L	L	T	Q	L	Y	G	D	R	M	L	I	A	N	A	T	G	C	S	S	I	Y	G	G	N	L	P	S	T	.	.	.	P	Y	T	T	D	A	N	G	R	G	P	A	W	A	N	S	L	F	E	D	N	A	E	F	G	L	G	F	R	L	T	V	D	Q	H	R	V	R	V	L	R	L	L	D	Q	F
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.					.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Sequence		W	N	Q	L	G	N	F	L	Q	E	G	D	V	V	I	A	E	T	G	T	S	A	F	G	I	N	Q	T	T	F	P	N	N	T	Y	G	I	S	.	.	.	.	.	.	.	Q	V	L	W	G	S	I	G	F	T	T	G	A	T	L	G	A	A	F	A	A	E	E	I	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						T	T	T			T	T							T	T						G	G	G					S	S						.	.	.	.	.	.	.		T	T	T			T	T																		.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.								.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.
		905	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	K	I	P	A	E	L	L	T	A	L	K	S	D	A	T	P	E	V	R	R	E	Q	V	A	A	L	R	Q	Q	L	N	D	V	A	E	A	H	E	L	L	R	D	A	D	A	L	V	E	K	S	I	W	L	I	G	G	D	G	W	A	Y	D	I	G	F	G	G	L	D	H	V	L	S	L	T	E	N	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	K	R	V	I	L	F	I	G	D	G	S	L	Q	.	L	T	V	Q	E	I	S	T	M	I	R	W	G	L	K	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T														.			G	G	G							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
																																																		434	.	.	.	.	.	440	.	.	.	.	.	.	.	.		.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		985	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.			1060	.	.
Predicted Secondary structure																																																																													.	.
Query SS confidence																																																																													.	.
Query Sequence		N	I	L	V	L	D	T	Q	C	Y	S	N	T	G	G	Q	A	S	K	A	T	P	L	G	A	V	T	K	F	G	E	H	G	K	R	K	A	R	K	D	L	G	V	S	M	M	M	Y	G	H	V	Y	V	A	Q	I	S	L	G	A	Q	L	N	Q	T	V	K	A	I	Q	E	A	E	A	Y	.	.	P	G	P
Query Conservation																																																																													.	.
Alig confidence												.	.	.																				.	.	.	.	.	.	.																				.																	.	.
Template Conservation												.	.	.																				.	.	.	.	.	.	.																				.
Template Sequence		Y	L	F	V	L	N	N	D	G	Y	.	.	.	T	I	E	K	L	I	H	G	P	K	A	Q	Y	N	E	I	Q	G	W	.	.	.	.	.	.	.	D	H	L	S	L	L	P	T	F	G	A	K	D	Y	E	T	H	R	V	.	A	T	T	G	E	W	D	K	L	T	Q	D	K	S	F	N	D	N	S	K	I
Template Known Secondary structure								S	S	S		.	.	.					T	T	S		T	T		G	G	G						.	.	.	.	.	.	.		G	G	G					T	T		S	S							.		B									T		T	T	T	T	S		S	S
Template Predicted Secondary structure												.	.	.																				.	.	.	.	.	.	.																				.
Template SS confidence
		465	.	.	.	.	470	.	.	.	.				.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.								.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.		.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
		1063	.	.	.	.	.	.	1070
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	I	I	A	Y	S	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	M	I	E	I	M	L	P
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions