Return to main results Retrieve Phyre Job Id

Job DescriptionP52647
Confidence34.05%DateThu Jan 5 12:05:59 GMT 2012
Rank217Aligned Residues77
% Identity25%Templated1ofua1
SCOP infoTubulin nucleotide-binding domain-like Tubulin nucleotide-binding domain-like Tubulin, GTPase domain
Resolution2.1

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   236...240.........250.........260.........270.........280.........290.........300. ......
Predicted Secondary structure 
























.



.......
Query SS confidence 

































































.





. . . . . . .
Query Sequence  YDHVEQAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAIGTCEEVVDELLTRGEKVGVLKVRLY. RPFSAK. . . . . . .
Query Conservation     
           

 
  

  
  


 


  

    
 


  
   
 







  . 


  .......
Alig confidence 














............






































.





.......
Template Conservation    

      
   
............   
 
 
 









  
 

   
    
 



  

  

  
   
Template Sequence  RQAALEDRERISEVL. . . . . . . . . . . . EGADMVFITTGMGGGTGTGAAPIIAEVAKEMGILTVAVVTRPFPFEGRKRMQI
Template Known Secondary structure  T............TT
STTSSTT


GGG
Template Predicted Secondary structure  ............




















Template SS confidence 















































































   7980.........90... ......100.........110.........120.........130.........140......
 
   308.310.........320....
Predicted Secondary structure  ..


Query SS confidence  . .
















Query Sequence  . . HLLQALPGSVRSVAVLD
Query Conservation  .. 
   
  
 
 
 


Alig confidence  ..
















Template Conservation 
   
  
    
 




Template Sequence  ADEGIRALAESVDSLITIP
Template Known Secondary structure  TT
S
Template Predicted Secondary structure 

Template SS confidence 


















   147..150.........160.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions