Job Description P52647 Confidence 97.88% Date Thu Jan 5 12:05:59 GMT 2012 Rank 139 Aligned Residues 214 % Identity 21% Template d1itza1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like PP module Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		853	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	L	P	S	T	P	Y	T	T	D	A	N	G	R	G	P	A	W	A	N	S	L	F	E	D	N	A	E	F	G	L	G	F	R	L	T	V	D	Q	H	R	V	R	V	L	R	L	L	D	Q	F	A	D	K	I	P	A	E	L	L	T	A	L	K	S	D	A	T	P	E	V	R	R	E	Q	V	A	A	L
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	E	T	P	G	V	E	V	T	T	G	P	L	G	Q	G	I	A	.	.	.	.	.	.	.	.	.	.	.	N	A	V	G	L	A	L	A	E	K	H	L	A	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T		T	T			S				S	T	T					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.												.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		933	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.			.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		R	Q	Q	L	N	D	V	A	E	A	H	E	L	L	R	D	A	D	A	L	V	E	K	S	I	W	L	I	G	G	D	G	W	A	Y	.	.	D	I	G	F	G	G	L	D	H	V	L	S	L	T	E	N	V	N	I	L	V	L	D	T	Q	C	Y	S	N	T	G	G	Q	A	S	K	A	T	P	L	G	A	V
Query Conservation																																					.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																								.	.			.																									.	.	.	.	.							.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.																												.																									.	.	.	.	.							.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	F	N	K	P	D	S	E	I	V	D	H	Y	T	Y	V	I	L	G	D	G	C	Q	M	E	G	I	A	.	N	E	A	C	S	L	A	G	H	W	G	L	G	K	L	I	A	F	Y	D	D	N	H	I	.	.	.	.	.	S	I	D	G	D	T	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.			B	T	T	B																		S				.										T	T		T	T									S		.	.	.	.	.		T	T			G	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																												.																									.	.	.	.	.							.	.	.	.	.
Template SS confidence
														150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.
		1011	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.		.	.	.	.	.	.	.	.												1070	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	F	G	E	H	G	K	R	K	A	R	K	D	L	G	V	S	M	M	M	Y	G	H	V	Y	V	A	Q	I	S	L	G	A	Q	L	N	Q	T	V	K	A	I	Q	E	A	E	A	Y	P	G	.	P	S	L	I	I	A	Y	S	.	.	.	.	.	.	.	.	.	.	.	P	C	E	E	H	G	Y	D	L
Query Conservation																																																					.									.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																													.									.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	I	A	F	T	E	D	V	S	T	R	F	E	A	L	G	W	H	T	I	W	V	K	N	G	N	T	G	Y	D	D	I	R	A	A	I	K	E	A	K	A	V	T	D	K	P	T	L	I	K	V	T	T	T	I	G	F	G	S	P	N	K	A	N	S	Y	S	V	H	G	S	A	L
Template Known Secondary structure		.	.	.	.	.	.	.	G	G	T			S									T	T							S		T	T	T																	S	S										T	T	T	T		T	T	T	T	T	S	G	G	G	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		1079	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	S	H	D	Q	M	R	Q	L	T	A	T	G	F	W	P	L	Y	R	F	D	P	R	R	A	D	E	G	K	L	P	L	A	L	D	S	R	P	P	S	E	A	P	E	E	T	L	L	H	E	Q	R	F	R	R	L	N	S	Q	Q	P	E	V	A	E	Q	L	W	K	D	A
Query Conservation
Alig confidence				.	.																	.	.	.	.	.
Template Conservation				.	.																	.	.	.	.	.
Template Sequence		G	A	.	.	K	E	V	E	A	T	R	Q	N	L	G	W	P	Y	D	T	.	.	.	.	.	F	F	V	P	E	D	V	K	S	H	W	S	R	H	T	P	E	G	A	A	L	E	A	D	W	N	A	K	F	A	E	Y	E	K	K	Y	A	D	D	A	A	T	L	K	S	I	I
Template Known Secondary structure				.	.											T					T	.	.	.	.	.	T											T	T																							S
Template Predicted Secondary structure				.	.																	.	.	.	.	.
Template SS confidence
		280	.			.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.						.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions