Job Description P52647 Confidence 97.78% Date Thu Jan 5 12:05:59 GMT 2012 Rank 142 Aligned Residues 223 % Identity 17% Template d1gpua1 SCOP info Thiamin diphosphate-binding fold (THDP-binding) Thiamin diphosphate-binding fold (THDP-binding) TK-like PP module Resolution 1.86

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		851	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	G	N	L	P	S	T	P	Y	T	T	D	A	N	G	R	G	P	A	W	A	N	S	L	F	E	D	N	A	E	F	G	L	G	F	R	L	T	V	D	Q	H	R	V	R	V	L	R	L	L	D	Q	F	A	D	K	I	P	A	E	L	L	T	A	L	K	S	D	A	T	P	E	V	R	R	E	Q	V	A
Query Conservation
Alig confidence																.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	S	R	T	P	G	H	P	E	F	E	L	P	.	.	.	G	V	E	V	T	T	G	P	L	G	Q	G	I	S	N	A	V	G	M	A	M	A	Q	A	N	L	A	A	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T		S			S	S			T	T	S	T	.	.	.	T			S				S	T	T																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.				110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		931	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.							.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.
Query Sequence		A	L	R	Q	Q	L	N	D	V	A	E	A	H	E	L	L	R	D	A	D	A	L	V	E	K	S	I	W	L	I	G	G	D	G	W	A	Y	D	I	G	F	G	.	.	.	.	.	.	G	L	D	H	V	L	S	L	T	E	N	V	N	I	L	V	L	D	T	Q	C	Y	S	N	T	G	G	Q	A	S	K	A
Query Conservation																																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.			.	.	.	.	.	.																															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																																							.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	K	P	G	F	T	L	S	D	N	Y	T	Y	V	F	L	G	D	G	C	.	.	.	.	.	L	Q	E	G	I	S	S	E	A	S	S	L	A	G	H	L	K	L	G	N	L	I	A	I	Y	D	D	N	K	I	T	I	D	G	A	T	S	I	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.			B	T	T	B																.	.	.	.	.			S													T	T		T	T									S			T	T			G	G	G	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.																																							.	.
Template SS confidence
																139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.						160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		1005	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.		1060	.	.	.	.	.	.	.	.	.	1070	.	.		.	.	.	.	.	.	.	1080	.
Predicted Secondary structure																																																									.														.										.
Query SS confidence																																																									.														.										.
Query Sequence		T	P	L	G	A	V	T	K	F	G	E	H	G	K	R	K	A	R	K	D	L	G	V	S	M	M	M	Y	G	H	V	Y	V	A	Q	I	S	L	G	A	Q	L	N	Q	T	V	K	A	I	Q	E	A	E	A	Y	.	P	G	P	S	L	I	I	A	Y	S	P	C	E	.	E	H	G	Y	D	L	A	L	S	.
Query Conservation																																																									.														.										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.														.										.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	F	D	E	D	V	A	K	R	Y	E	A	Y	G	W	E	V	L	Y	V	E	N	G	N	E	D	L	A	G	I	A	K	A	I	A	Q	A	K	L	S	K	D	K	P	T	L	I	K	M	T	T	T	I	G	Y	G	S	L	H	A	G	S	H	S	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T													T							S		T	T	T																T	T	S										T	T	T	T	S	T	T	T	T	S	G	G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																	198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
									1082	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150
Predicted Secondary structure		.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	H	D	Q	M	R	Q	L	T	A	T	G	F	W	P	L	Y	R	F	D	P	R	R	A	D	E	G	K	L	P	L	A	L	D	S	R	P	P	S	E	A	P	E	E	T	L	L	H	E	Q	R	F	R	R	L	N	S	Q	Q	P	E	V	A	E	Q	L	W	K	D	A
Query Conservation		.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																			.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		H	G	A	P	L	K	A	D	D	V	K	Q	L	K	S	K	F	G	F	N	P	D	K	S	F	.	.	.	.	V	V	P	Q	E	V	Y	D	H	Y	Q	K	T	I	L	K	P	G	V	E	A	N	N	K	W	N	K	L	F	S	E	Y	Q	K	K	F	P	E	L	G	A	E	L	A	R	R	L
Template Known Secondary structure		S	S	S														T	T			T	T			S	.	.	.	.														T
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions