Job Description P52647 Confidence 99.42% Date Thu Jan 5 12:05:59 GMT 2012 Rank 42 Aligned Residues 252 % Identity 13% Template c3mosA_ PDB info PDB header:transferase Chain: A: PDB Molecule:transketolase; PDBTitle: the structure of human transketolase Resolution 1.75 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		N	G	A	V	A	S	V	A	F	R	T	S	E	V	I	A	I	Y	P	I	T	P	S	S	T	M	A	E	Q	A	D	A	W	A	G	N	G	L	K	N	V	W	G	D	T	P	R	V	V	E	M	Q	S	E	A	G	A	I	A	T	V	H	G	A	L	Q	T	G	.	A	L	S	T	S	F	T	S	S	Q	G
Query Conservation																																																																						.
Alig confidence																																							.	.	.	.	.	.	.	.	.																							.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		G	Q	A	L	A	K	L	G	H	A	S	D	R	I	I	A	L	D	G	D	T	K	N	S	T	F	S	E	I	F	K	K	E	H	P	D	R	.	.	.	.	.	.	.	.	.	F	I	E	C	Y	I	A	E	Q	N	M	V	S	I	A	V	G	C	A	T	R	N	R	T	V	P	F	C	S	T	F	A	A	F
Template Known Secondary structure													T	T						S	S						S									G	G	G	.	.	.	.	.	.	.	.	.						S														G	G	G										G	G	G
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.										.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure																													.																					.
Query SS confidence																													.																					.
Query Sequence		L	L	L	M	I	P	T	L	Y	K	L	A	G	E	L	T	P	F	V	L	H	V	A	A	R	T	V	.	A	T	H	A	L	S	I	F	G	D	H	S	D	V	M	A	V	R	Q	T	.	G	C	A	M	L	C	A	A	N	V	Q	E	A	Q	D	F	A	L	I	S	Q	I	A	T	L	K	S	R	V	P	F
Query Conservation																													.																					.
Alig confidence																													.																					.																						.	.	.	.
Template Conservation																																																																								.	.	.	.
Template Sequence		F	T	R	A	F	D	Q	I	R	M	A	A	I	S	E	S	N	I	N	L	C	G	S	H	C	G	V	S	I	G	E	D	G	P	S	Q	M	A	L	E	D	L	A	M	F	R	S	V	P	T	S	T	V	F	Y	P	S	D	G	V	A	T	E	K	A	V	E	L	A	A	.	.	.	.	N	T	K	G	I	C
Template Known Secondary structure		G	G	G	G										T	T									S	B	S	G	G	G		T	T		G	G	G		B	S	S							T	S	T	T								S													.	.	.	.	T			S
Template Predicted Secondary structure																																																																								.	.	.	.
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.					.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	H	F	F	D	G	F	R	T	S	H	E	I	N	K	I	V	P	L	A	D	D	T	I	L	D	L	M	P	Q	V	E	I	D	A	H	R	A	R	A	L	N	P	E	H	P	V	I	R	G	T	S	A	N	P	D	T	Y	F	Q	S	R	E	A	T	N	P	W	Y	N	A	V	Y	D	H	V	E	Q	A	M
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	R	T	S	R	P	E	N	A	I	I	Y	N	N	N	E	D	F	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure							S	S			B			S		T	T					T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	F	S	A	A	T	G	R	Q	Y	Q	P	F	E	Y	Y	G	H	P	Q	A	E	R	V	I	I	L	M	G	S	A	I	G	T	C	E	E	V	V	D	E	L	L	T	R	G	E	K	V	G	V	L	K	V	R	L	Y	R	P	F	S	A	K	H	L	L	Q	A	L	P	G	S	V	R	S	V	A	V	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	G	Q	A	K	V	V	L	K	S	K	D	D	Q	V	T	V	I	G	A	G	V	T	L	H	E	A	L	A	A	A	E	L	L	K	K	E	K	I	N	I	R	V	L	D	P	F	T	I	K	P	L	D	R	K	L	I	L	D	S	A	R	A	T	K	G	R	I	L	T	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	T									S	S									T															T	T	T									S				S													T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.
Template SS confidence
												490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	T	K	E	P	G	A	Q	A	E	P	L	Y	L	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	D	H	Y	Y	E	G	G	I	G	E	A	V	S	S	A	V
Template Known Secondary structure						S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions