Job Description P52647 Confidence 99.66% Date Thu Jan 5 12:05:59 GMT 2012 Rank 28 Aligned Residues 525 % Identity 14% Template c2vbiF_ PDB info PDB header:lyase Chain: F: PDB Molecule:pyruvate decarboxylase; PDBTitle: holostructure of pyruvate decarboxylase from acetobacter2 pasteurianus Resolution 2.75 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure															.																																																							.
Query SS confidence															.																																																							.
Query Sequence		T	I	D	G	N	G	A	V	A	S	V	A	F	.	R	T	S	E	V	I	A	I	Y	P	I	T	P	S	S	T	M	A	E	Q	A	D	A	W	A	G	N	G	L	K	N	V	W	G	D	T	P	R	V	V	E	M	Q	S	E	A	G	A	I	A	T	V	H	G	.	A	L	Q	T	G	A	L	S	T	S	F
Query Conservation															.																																																							.
Alig confidence															.																									.	.	.	.	.	.	.	.	.	.																					.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Y	T	V	G	M	Y	L	A	E	R	L	V	Q	I	G	L	K	H	H	F	A	V	A	G	D	Y	N	L	V	L	L	D	Q	L	L	L	N	.	.	.	.	.	.	.	.	.	.	K	D	M	K	Q	I	Y	C	C	N	E	L	N	C	G	F	S	A	E	G	Y	A	R	S	N	G	A	A	A	A	V	V
Template Known Secondary structure				B													T		S								T	T	T									T		.	.	.	.	.	.	.	.	.	.	T	T	S						S	S																S
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.									.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.	.
Query Sequence		T	S	S	Q	G	L	L	L	M	I	P	T	L	Y	K	L	A	G	E	L	T	P	F	V	L	H	V	A	A	R	T	V	A	T	H	A	L	S	I	F	G	D	.	.	.	.	.	.	.	.	H	S	D	V	M	A	V	R	Q	T	G	C	A	M	L	C	A	A	N	V	Q	E	A	Q	D	F	A	L	I	S
Query Conservation																																												.	.	.	.	.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	S	V	G	A	I	S	A	M	N	A	L	G	G	A	Y	A	E	N	L	P	V	I	L	I	S	G	A	P	N	S	N	D	Q	G	T	G	H	I	L	H	H	T	I	G	K	T	D	Y	S	Y	Q	L	E	M	A	R	Q	V	T	C	A	A	E	S	I	T	D	A	H	S	A	P	A	K	I	D	H	V
Template Known Secondary structure			T	T	T	T														T	T												G	G	G	T	T	T	T				T	T	S		S	S	S			T								T	T		S							S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.					.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.
Query SS confidence																		.	.	.	.
Query Sequence		Q	I	A	T	L	K	S	R	V	P	F	I	H	F	F	D	.	.	.	.	G	F	R	T	S	H	E	I	N	K	I	V	P	L	A	D	D	T	I	L	D	L	M	P	Q	V	E	I	D	A	H	R	A	R	A	L	N	P	E	H	P	V	I	R	G	T	S	A	N	P	D	T	Y	F	Q	S	R	E	A	T
Query Conservation																		.	.	.	.
Alig confidence																		.	.	.	.																																																				.	.	.	.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.	.	.	.
Template Sequence		I	R	T	A	L	R	E	R	K	P	A	Y	L	D	I	A	C	N	I	A	S	E	P	C	V	R	P	G	P	V	S	S	L	L	S	E	P	E	I	D	H	T	S	L	K	A	A	V	D	A	T	V	A	L	L	E	K	S	A	S	P	V	M	L	L	G	S	K	L	R	A	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									T									T	T	T	T	T	S	B								S		S																								T		S								T	T	T	T	T	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		N	P	W	Y	N	A	V	Y	D	H	V	E	Q	A	M	N	D	F	S	A	A	T	G	R	Q	Y	Q	P	F	E	Y	Y	G	H	P	Q	A	E	R	V	I	I	L	M	G	S	A	.	I	G	T	C	E	E	V	V	D	E	L	L	T	R	G	E	K	V	G	V	L	K	V	R	L	Y	R	P	F	S	A	K
Query Conservation																																																	.
Alig confidence		.	.	.	.																																												.										.	.	.	.	.					.
Template Conservation		.	.	.	.																																																						.	.	.	.	.					.
Template Sequence		.	.	.	.	A	N	A	L	A	A	T	E	T	L	A	D	K	L	Q	C	A	V	T	I	M	A	A	A	K	G	F	F	P	E	D	H	A	G	F	R	G	L	Y	W	G	E	V	S	N	P	G	V	Q	E	L	V	E	.	.	.	.	.	T	S	D	A	.	L	L	C	I	A	P	V	F	N	D	Y	S	T
Template Known Secondary structure		.	.	.	.	T	T																				G	G	G	T	T	S	S		T	T	S	T	T							G	G	G	S		T	T							.	.	.	.	.	T		S		.					S					T	T	T	T
Template Predicted Secondary structure		.	.	.	.																																																						.	.	.	.	.					.
Template SS confidence
						223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.						.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.
		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.				.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370			.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																	.	.	.																																																	.	.
Query SS confidence																	.	.	.																																																	.	.
Query Sequence		H	L	L	Q	A	L	P	G	S	V	R	S	V	A	V	.	.	.	L	D	R	T	K	E	P	G	A	Q	A	E	P	L	Y	L	D	V	M	T	A	L	A	E	A	F	N	N	G	E	R	E	T	L	P	R	V	I	G	G	R	Y	G	L	S	S	K	E	.	.	F	G	P	D	C	V	L	A	V	F	A	E
Query Conservation																	.	.	.																																																	.	.
Alig confidence																	.	.	.																																																	.	.
Template Conservation
Template Sequence		V	G	W	S	A	W	P	K	G	P	N	V	I	L	A	E	P	D	R	V	T	V	D	G	R	A	Y	D	G	F	T	L	R	A	F	L	Q	A	L	A	E	K	A	P	A	R	P	A	S	A	Q	K	S	S	V	P	T	C	S	L	T	A	T	S	D	E	A	G	L	T	N	D	E	I	V	R	H	I	N	A
Template Known Secondary structure		T	T	T	T	S				S	T	T						S	S					T	T					S	S																						T	S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	A	A	K	P	K	A	R	F	T	V	G	I	Y	D	D	V	T	N	L	S	L	P	L	P	E	N	T	L	P	N	S	A	K	L	E	A	L	F	Y	G	L	G	S	D	G	S	V	S	A	T	K	N	N	I	K	I	I	G	N	S	T	P	W	Y	A	Q	G	Y	F	V	Y	D	S	K	K	A	G	G
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template Sequence		L	L	T	S	N	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	V	A	E	T	G	D	S	W	F	N	A	M	R	M	T	L	P	R	.	G	A
Template Known Secondary structure					T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S								T					T	.	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.
Template SS confidence
		373	.	.	.	.	.																																																				.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	S	H	L	R	V	S	E	Q	P	I	R	S	A	Y	L	I	S	Q	A	D	F	V	G	C	H	Q	L	Q	F	I	D	K	Y	Q	M	A	E	R	L	K	P	G	G	I	F	L	L	N	T	P	Y	S	A	D	E	V	W	S	R	L	P	Q	E	V	Q	A	V	L	N	Q	K	K	A	R	F	Y	V
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.															.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.															.
Template Sequence		R	V	E	L	E	M	Q	W	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	W	S	V	P	S	A	F	G	N	A	M	G	S	Q	D	R	.	.	Q	H	V	V	M	V	G	D	G	S	F	Q	L	T	.	A	Q	E	V	A	Q	M	V	R	Y	E	L	P	V	I	I	F	L
Template Known Secondary structure							T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	T											T		T	T	S	.	.															.	G	G	G							T	T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.															.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410																		.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.			.	430	.	.	.	.	.	.	.	.	.	440	.	.		.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460
		543	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.				.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.
Query SS confidence																																																								.	.	.
Query Sequence		I	N	A	A	K	I	A	R	E	C	G	L	A	A	R	I	N	T	V	M	Q	M	A	F	F	H	L	T	Q	I	L	P	G	D	S	A	L	A	E	L	Q	G	A	I	A	K	S	Y	S	S	K	G	Q	D	.	.	.	L	V	E	R	N	W	Q	A	L	A	L	A	R	E	S	V	E	E	V	P	L	Q	P
Query Conservation																																																								.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	N	N	R	G	Y	V	I	E	I	A	I	H	D	G	P	Y	N	Y	I	K	N	W	D	Y	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	M	E	V	F	N	A	G	E	G	H	G	L	G	L	K	A	T	T	P	K	E	L	T	E	A	I	A	R	A	K	A	N	T	R	G	P
Template Known Secondary structure					S	S						T	T	S			G	G	G							T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T							T	T	T										S																S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.																	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.
		620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	P	H	S	A	N	R	P	P	V	V	S	D	A	A	P	D	F	V	K	T	V	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	I	E	C	Q	I	D	R	T	D	C	T	D	M	L	V	Q	W	G	R	K	V	A	S
Template Known Secondary structure										T	T
Template Predicted Secondary structure
Template SS confidence
		525	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.