Job Description P52647 Confidence 99.75% Date Thu Jan 5 12:05:59 GMT 2012 Rank 20 Aligned Residues 497 % Identity 14% Template c2pgnA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:cyclohexane-1,2-dione hydrolase (cdh); PDBTitle: the crystal structure of fad and thdp-dependent cyclohexane-1,2-dione2 hydrolase in complex with cyclohexane-1,2-dione Resolution 1.20 Å

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		5	.	.	.	.	10	.	.	.	.	.		.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.
Predicted Secondary structure													.																																																														.	.
Query SS confidence													.																																																														.	.
Query Sequence		D	G	N	G	A	V	A	S	V	A	F	.	R	T	S	E	V	I	A	I	Y	P	I	T	P	S	S	T	M	A	E	Q	A	D	A	W	A	G	N	G	L	K	N	V	W	G	D	T	P	R	V	V	E	M	Q	S	E	A	G	A	I	A	T	V	H	G	A	L	Q	T	G	A	L	.	.	S	T	S	F	T
Query Conservation													.																																																														.	.
Alig confidence													.																												.	.	.	.	.	.	.	.	.																										.	.
Template Conservation																																									.	.	.	.	.	.	.	.	.
Template Sequence		R	G	A	D	L	I	V	E	A	L	E	E	Y	G	T	E	Q	V	V	G	F	I	G	H	T	S	H	F	V	A	D	A	F	S	K	S	H	L	G	.	.	.	.	.	.	.	.	.	K	R	V	I	N	P	A	T	E	L	G	G	A	W	M	V	N	G	Y	N	Y	V	K	D	R	S	A	A	V	G	A	W
Template Known Secondary structure														T	T									S	G	G	G									T	S	T	T	S	.	.	.	.	.	.	.	.	.	T	T		B			S	S																T	S
Template Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	Q	G	L	L	L	M	I	P	T	L	Y	K	L	A	G	E	L	T	P	F	V	L	H	V	A	A	R	T	V	A	T	H	A	L	S	I	F	G	D	H	S	D	V	M	A	V	R	Q	T	G	C	A	M	L	C	A	A	N	V	Q	E	A	Q	D	F	A	L	I	S	Q	I	A	T	L	K	S	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	C	V	G	N	L	L	L	H	A	A	M	Q	E	A	R	T	G	R	I	P	A	V	H	I	G	L	N	S	D	G	R	L	A	G	R	S	E	A	A	Q	Q	V	P	W	Q	S	F	T	P	I	A	R	S	T	Q	R	V	E	R	L	D	K	V	G	E	A	I	H	E	A	F	R	V	A	E	G	H	P	A
Template Known Secondary structure			G	G	G	G	G	G											T	T										S		G	G	G	T	T		T	T		S	S				G	G	G	G	T	T	T	S	S							S	G	G	G													T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
			162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	P	F	I	H	F	F	D	G	F	R	T	S	H	E	I	N	K	I	V	P	L	A	D	D	T	I	L	D	L	M	P	Q	V	E	I	D	A	H	R	A	R	A	L	N	P	E	H	P	V	I	R	G	T	S	A	N	P	D	T	Y	F	Q	S	R	E	A	T	N	P	W	Y	N	A	V	Y	D	H	V	E
Query Conservation		.
Alig confidence		.								.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	P	A	Y	V	D	I	P	.	F	D	L	T	A	D	Q	I	D	D	K	A	L	V	P	R	G	A	T	R	A	K	S	V	L	H	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	D	V	R
Template Known Secondary structure										.	T										T	T	T	S															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.																																							.	.	.	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.														.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																																																			.							.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.							.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	M	N	D	F	S	A	A	T	G	R	Q	Y	Q	P	F	E	Y	Y	G	H	P	Q	A	E	R	V	I	I	L	M	G	S	A	I	G	T	C	E	E	V	V	D	E	L	L	T	R	.	G	E	K	V	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	V	R	L	Y	R	P	F	S	A
Query Conservation																																																			.							.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	A	A	A	Q	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	K	N	P	V	I	L	A	G	G	G	V	A	R	S	G	G	S	E	A	L	L	K	L	A	E	M	V	G	V	P	V	V	T	T	S	T	G	A	G	V	F	P	E	T	H	A	L	A	M	G	S	A	G	F	C	G	W
Template Known Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.			S	S													T													T							T	T	T	T	T	S	S		T	T	S	T	T						S	T	T	S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		197	.	.	200	.	.	.															.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	H	L	L	Q	A	L	P	G	S	V	R	S	V	A	V	L	D	R	T	K	E	P	G	A	Q	A	E	P	L	Y	L	D	V	M	T	A	L	A	E	A	F	N	N	G	E	R	E	T	L	P	R	V	I	G	G	R	Y	G	L	S	S	K	E	F	G	P	D	C	V	L	A	V	F	A	E	L	N	A	A
Query Conservation
Alig confidence												.																																																	.	.	.	.	.	.	.	.	.
Template Conservation												.																																																	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	A	N	D	M	M	A	A	A	.	D	F	V	L	V	L	G	S	R	L	S	D	W	G	I	A	Q	G	Y	I	T	K	M	P	K	F	V	H	V	D	T	D	P	A	V	L	G	T	F	Y	F	P	L	L	S	V	V	A	.	.	.	.	.	.	.	.	.	D	A	K	T	F	M	E	Q	L	I	E	V
Template Known Secondary structure												.	S						S					T	T	T	T	T	T	T	T	T					S						S		G	G	G	T	T	S	S	S			S						.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320										.	.	.	.	.	.	.	.	.	330	.	.
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.															.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	P	K	A	R	F	T	V	G	I	Y	D	D	V	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	L	P	L	P	E	N	T	L	P	N	S	A	K	L	E	A	L	F	Y	G	L	G	S	D	G	S	V	S	A	T	K	N	N	I	K	I	I	G	N	S	T	P	W	Y	A	Q	G	Y
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.
Template Sequence		L	P	G	T	S	G	F	K	A	V	R	Y	Q	E	R	E	N	F	R	Q	A	T	E	F	R	A	A	W	D	G	W	V	R	E	Q	E	S	G	D	G	M	P	A	S	M	F	R	A	M	.	.	.	.	.	.	.	A	E	V	R	K	V	Q	R	P	E	D	I	I	V	T	D	I	G	N	H	T	L	P	M
Template Known Secondary structure		G	G	G	S	T	T						G	G	G	S	T	T																			T					S	S								.	.	.	.	.	.	.						T			T	T							S	S	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.								.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
		453	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	Y	D	S	K	K	A	G	G	L	T	V	S	H	L	R	V	S	E	Q	P	I	R	S	A	Y	L	I	S	Q	A	D	F	V	G	C	H	Q	L	Q	F	I	D	K	Y	Q	M	A	E	R	L	K	P	G	G	I	F	L	L	N	T	P	Y	S	A	D	E	V	W	S	R	L	P	Q	E	V	Q	A	V
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																							.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																							.
Template Sequence		F	G	G	A	I	L	Q	R	P	R	R	L	V	T	S	M	A	E	G	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	C	G	F	P	M	A	L	G	A	.	.	Q	L	A	E	P	N	S	R	V	F	L	G	T	G	D	G	A	L	Y	Y	H	F	.	N	E	F	R	V	A	V
Template Known Secondary structure								S	S	T	T				S		T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T										.	.					T	T	S															G	.	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																							.
Template SS confidence
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.																		.	.	.	.	430	.	.	.	.	.	.			.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.		.	460	.	.	.	.	.
		533	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.			.	.	.	.	.	.	.	.	610
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		L	N	Q	K	K	A	R	F	Y	V	I	N	A	A	K	I	A	R	E	C	G	L	A	A	R	I	N	T	V	M	Q	M	A	F	F	H	L	T	Q	I	L	P	G	D	S	A	L	A	E	L	Q	G	A	I	A	K	S	Y	S	S	K	G	Q	D	L	V	E	R	N	.	.	W	Q	A	L	A	L	A	R	E
Query Conservation																																																																							.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	K	L	P	V	I	T	M	V	F	T	N	E	S	Y	G	A	N	W	T	L	M	N	H	Q	F	G	Q	N	N	W	T	E	F	M	N	P	D	W	.	.	.	.	.	.	.	.	.	.	.	V	G	I	A	K	A	F	G	A	Y	G	E	S	V	R	E	T	G	D	I	A	G	A	L	Q	R	A	I	D
Template Known Secondary structure			T	T											S	B													S	S			S		B							.	.	.	.	.	.	.	.	.	.	.								T							T	T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		466	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.												.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
		611
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		535