Job Description P52647 Confidence 99.15% Date Thu Jan 5 12:05:59 GMT 2012 Rank 59 Aligned Residues 283 % Identity 12% Template c2o1sC_ PDB info PDB header:transferase Chain: C: PDB Molecule:1-deoxy-d-xylulose-5-phosphate synthase; PDBTitle: 1-deoxy-d-xylulose 5-phosphate synthase (dxs) from2 escherichia coli Resolution 2.40 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	A	V	A	S	V	A	F	R	T	S	E	V	I	A	I	Y	P	I	T	P	S	S	T	M	A	E	Q	A	D	A	W	A	G	N	G	L	K	N	V	W	G	D	T	P	R	V	V	E	M	Q	S	E	A	G	A	I	A	T	V	H	G	A	L	Q	T	G	A	L	S	T	S	F	T	S	S	Q	G	L
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		G	D	W	L	C	E	T	A	A	K	D	N	K	L	X	A	I	T	P	A	X	R	E	G	S	G	X	V	E	F	S	R	K	F	P	D	R	.	.	.	.	.	.	.	.	.	Y	F	D	V	A	I	A	E	Q	H	A	V	T	F	A	A	G	L	A	I	G	G	Y	K	P	I	V	A	I	Y	S	T	F	L
Template Known Secondary structure													T	T						S	S		T	T	T	T	T									T	T	S	.	.	.	.	.	.	.	.	.						S															T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.										.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure											.																																						.
Query SS confidence											.																																						.
Query Sequence		L	L	M	I	P	T	L	Y	K	.	L	A	G	E	L	T	P	F	V	L	H	V	A	A	R	T	V	A	T	H	A	L	S	I	F	G	D	H	S	D	V	M	A	V	R	Q	T	.	G	C	A	M	L	C	A	A	N	V	Q	E	A	Q	D	F	A	L	I	S	Q	I	A	T	L	K	S	R	V	P	F	I
Query Conservation											.																																						.
Alig confidence											.																																						.																									.	.	.
Template Conservation																																																																										.	.	.
Template Sequence		Q	R	A	Y	D	Q	V	L	H	D	V	A	I	Q	K	L	P	V	L	F	A	I	D	R	A	G	I	V	G	A	D	G	Q	T	H	Q	G	A	F	D	L	S	Y	L	R	C	I	P	E	X	V	I	X	T	P	S	D	E	N	E	C	R	Q	X	L	Y	T	G	Y	H	Y	N	.	.	.	D	G	P	S	A
Template Known Secondary structure		G	G	G								T	T	T	T	T									S		B				T	T		G	G	G		B		S					T	T	T	S	T	T							S	S													T			.	.	.	S	S
Template Predicted Secondary structure																																																																										.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.				.	470	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	F	F	D	G	F	R	T	S	H	E	I	N	K	I	V	P	L	A	D	D	T	I	L	D	L	M	P	Q	V	E	I	D	A	H	R	A	R	A	L	N	P	E	H	P	V	I	R	G	T	S	A	N	P	D	T	Y	F	Q	S	R	E	A	T	N	P	W	Y	N	A	V	Y	D	H	V	E	Q	A	M	N
Query Conservation
Alig confidence					.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	R	Y	.	.	.	.	.	.	.	P	R	G	N	A	V	G	V	E	L	T	P	L	E	K	L	P	I	G	K	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure					.	.	.	.	.	.	.		S	S	B														T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		474	.	.								.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	F	S	A	A	T	G	R	Q	Y	Q	P	F	E	Y	Y	G	H	P	Q	A	E	R	V	I	I	L	M	G	S	A	I	G	T	C	E	E	V	V	D	E	L	L	T	R	G	E	K	V	G	V	L	K	V	R	L	Y	R	P	F	S	A	K	H	L	L	Q	A	L	P	G	S	V	R	S	V	A	V	L	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.																										.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.																										.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	K	R	R	G	E	K	L	A	I	L	N	F	G	T	L	X	P	E	A	A	K	V	A	E	S	L	.	.	.	.	.	N	A	T	L	V	D	X	R	F	V	K	P	L	D	E	A	L	I	L	E	X	A	A	S	H	.	E	A	L	V	T	V	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S							S	T	T												.	.	.	.	.	T											S													S	.	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.																										.
Template SS confidence
																498	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.						.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550		.	.	.	.	.	.	.
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.			.	.	.	.	.	.	.	.									370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																							.	.									.	.	.	.	.	.	.	.
Query SS confidence																																							.	.									.	.	.	.	.	.	.	.
Query Sequence		R	T	K	E	P	G	A	Q	A	E	P	L	Y	L	D	V	M	T	A	L	A	E	A	F	N	N	G	E	R	E	T	L	P	R	V	I	G	.	.	G	R	Y	G	L	S	S	K	.	.	.	.	.	.	.	.	E	F	G	P	D	C	V	L	A	V	F	A	E	L	N	A
Query Conservation																																							.	.									.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.											.	.									.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.
Template Sequence		E	N	A	I	X	G	G	A	G	S	G	V	N	E	V	L	X	A	H	.	.	.	.	.	.	.	.	R	K	P	V	P	V	L	N	I	G	L	P	D	F	F	I	P	Q	G	T	Q	E	E	X	R	A	E	L	G	L	D	A	A	G	X	E	A	K	I	K	A	W	L	A
Template Known Secondary structure					S	T	T	S												T	.	.	.	.	.	.	.	.	T												S	S					S									T	T		S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.
Template SS confidence
		558	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.									.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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