Job Description P52647 Confidence 98.46% Date Thu Jan 5 12:05:59 GMT 2012 Rank 121 Aligned Residues 142 % Identity 17% Template c2fugC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh-quinone oxidoreductase chain 3; PDBTitle: crystal structure of the hydrophilic domain of respiratory complex i2 from thermus thermophilus Resolution 3.30 Å

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		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	E	R	N	W	Q	A	L	A	L	A	R	E	S	V	E	E	V	P	L	Q	P	V	N	P	H	S	A	N	R	P	P	V	V	S	D	A	A	P	D	F	V	K	T	V	T	A	A	M	L	A	G	L	G	D	A	L	P	V	S	A	L	P	P	D	G	T	W	P	M	G	T	T	R	W	E	K	R	N
Query Conservation
Alig confidence																							.	.	.	.																																.	.	.	.	.	.	.
Template Conservation																							.	.	.	.																																.	.	.	.	.	.	.
Template Sequence		V	V	D	T	L	S	D	V	V	R	E	A	Q	A	G	M	V	E	F	T	L	.	.	.	.	L	N	H	P	L	D	C	P	T	C	D	K	G	G	A	C	E	L	Q	D	R	T	V	E	Y	G	L	Y	E	K	L	.	.	.	.	.	.	.	P	V	Y	T	R	F	E	F	T	R	R	H	V	D	K	H	H
Template Known Secondary structure					S																		.	.	.	.		T					T	T	T		T	T	G	G	G										T							.	.	.	.	.	.	.			S					S
Template Predicted Secondary structure																							.	.	.	.																																.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		677	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	E	E	I	P	I	W	K	E	E	L	C	T	Q	C	N	H	C	V	A	A	C	P	H	S	A	I	R	A	K	V	V	P	P	E	A	M	E	N	A	P	A	S	L	H	S	L	D	V	K	S	R	D	M	R	G	Q	K	Y	V	L	Q	V	A	P	E	D	C	T	G	C	N	L	C	V	E	V	C	P
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Sequence		P	L	S	P	F	V	I	L	D	R	E	R	C	I	H	C	K	R	C	V	R	Y	F	E	E	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	E	V	L	D	F	I	E	R	G	V	H	T	F	I	G	T	M	.	D	F	G	L	P	S	G	F	S	G	N	I	T	D	I	C	P
Template Known Secondary structure			S	S	S	S	S					S															T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								B	S		G	G	G		B				S	.	S	T	T			S	S			T							S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.																	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		757	.	.	760	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	D	R	Q	N	P	E	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	A	L	L	D	L	T	A	R
Template Known Secondary structure		S	S	S	S	B		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions