Job Description P52647 Confidence 99.35% Date Thu Jan 5 12:05:59 GMT 2012 Rank 50 Aligned Residues 80 % Identity 28% Template c1gthD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:dihydropyrimidine dehydrogenase; PDBTitle: dihydropyrimidine dehydrogenase (dpd) from pig, ternary2 complex with nadph and 5-iodouracil Resolution 2.25 Å

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		661	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.				700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		P	D	G	T	W	P	M	G	T	T	R	W	E	K	R	N	I	A	E	E	I	P	I	W	K	E	E	L	C	T	Q	C	N	H	C	V	A	A	C	.	.	.	P	H	S	A	I	R	A	K	V	V	P	P	E	A	M	E	N	A	P	A	S	L	H	S	L	D	V	K	S	R	D	M	R	G	Q	K	Y	V
Query Conservation																																									.	.	.
Alig confidence																																									.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template Sequence		I	G	K	A	L	Q	Y	L	G	T	F	G	E	L	S	N	I	E	Q	V	V	A	V	I	D	E	E	M	C	I	N	C	G	K	C	Y	M	T	C	N	D	S	G	Y	Q	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	F	D	P	.	E	T	H
Template Known Secondary structure		T	T	T	T	G	G	G				G	G	G	S		S	S	S								T	T	T															S		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	.	T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.
Template SS confidence
		925	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.																										.	.	.	.		.	.	.
		738	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.		.	.	760	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		L	Q	V	A	P	E	D	C	T	G	C	N	L	C	V	E	V	C	P	A	.	K	D	R	Q	N	P	E	I	K
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		L	P	T	V	T	D	T	C	T	G	C	T	L	C	L	S	V	C	P	I	I	D	C	I	R	M	V	S	R	T
Template Known Secondary structure							T	T												S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		979	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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