Return to main results Retrieve Phyre Job Id

Job DescriptionP0ADD7
Confidence98.08%DateThu Jan 5 11:20:44 GMT 2012
Rank137Aligned Residues43
% Identity23%Templated1smyf2
SCOP infoDNA/RNA-binding 3-helical bundle Sigma3 and sigma4 domains of RNA polymerase sigma factors Sigma4 domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   154.....160.........170.........180.........190......
Predicted Secondary structure 








Query SS confidence 










































Query Sequence  LTLSERKVLRLLGKGWGINQIASLLKKSNKTISAQKNSAMRRL
Query Conservation 

 

 


 

  
 
 



  
 

  

  
   
  

Alig confidence 










































Template Conservation 
   

 

 
     
  


  



   
     


 

Template Sequence  LSEREAMVLKLRKGLIDGEEVGAFFGVTRERIRQIENKALRKL
Template Known Secondary structure  S
TT



TTTSSSS
Template Predicted Secondary structure 









Template SS confidence 










































   361........370.........380.........390.........400...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions