 |
Job Description | P0ADD7 | Confidence | 99.58% | Date | Thu Jan 5 11:20:44 GMT 2012 |
Rank | 41 | Aligned Residues | 116 |
% Identity | 18% | Template | d1ny5a1 |
SCOP info | Flavodoxin-like
| CheY-like
| CheY-related
|
Resolution | 2.40 |
|
 |
  |   |
8 | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | G | I | V | I | S | K | I | P | V | M | Q | A | G | L | K | E | V | M | R | T | H | F | P | E | Y | E | I | I | S | S | A | S | A | E | D | L | T | L | L | Q | L | R | . |
. |
R | S | G | L | V | I | A | D | L | A | G | E | S | E | D | P | R | S | V | C | E | H | Y | Y | S | L | I | S | Q | Y | R | E | I | H | W |
Query Conservation |   |
  |   |
|
|
|
|
|   |
|
|
|
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   | . | . |   |   |
|   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   | . | . | . |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |
|
|   |
|   |   |
|   |   |   |   |
|   | . | . | . |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
|
Template Sequence |   |
N | V | L | V | I | E | D | D | K | V | F | R | G | L | L | E | E | Y | L | S | M | K | G | I | K | . |
. |
. |
V | E | S | A | E | R | G | K | E | A | Y | K | L | L | S | E | K | H | F | N | V | V | L | L | D | L | L | L | P | D | V | N | G | L | . |
. |
. |
E | I | L | K | W | I | K | E | R | S | P | E | T | E | V |
Template Known Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  | . | . | . |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  | S |
|
| S |  |  |  |  |  | S | B |
| S | S | S | B |  |  | . | . | . |  |  |  |  |  |  |  |  |  |
| T | T | S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  | . | . | . |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  | . | . | . |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | |
|
|
. | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
|
. | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
  |
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | F | M | V | S | R | S | W | Y | S | Q | A | V | E | L | L | M | C | P | T | A | T | L | L | S | D | V | E | P | I | E | N | L | V | K | T | V | R | S | G | N | T | H | A |
Query Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
I | V | I | T | G | H | G | T | I | K | T | A | V | E | A | M | K | M | G | A | Y | D | F | L | T | K | P | C | M | L | E | E | I | E | L | T | I | N | K | A | I | E | H | R |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|