 |
Job Description | P0ADD7 | Confidence | 99.52% | Date | Thu Jan 5 11:20:44 GMT 2012 |
Rank | 81 | Aligned Residues | 62 |
% Identity | 23% | Template | c1x3uA_ |
PDB info |
PDB header:transcription | Chain: A: PDB Molecule:transcriptional regulatory protein fixj; |
PDBTitle: solution structure of the c-terminal transcriptional2 activator domain of fixj from sinorhizobium melilot
|
Resolution | UNK |
|
 |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | L | S | E | R | K | V | L | R | L | L | G | K | G | W | G | I | N | Q | I | A | S | L | L | K | K | S | N | K | T | I | S | A | Q | K | N | S | A | M | R | R | L | A | I | H | S | N | A | E | M | Y | A | W | I | N | S | A | Q | G | A | R | E | L | N |
Query Conservation |   |
|
|   |
|
|   |
|
|
|   |
|
|   |   |
|   |
|   |
|
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |
|   |   |
|
|   |
|   |   |   |
|   |
|   |   |
|
|
|   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |
|
|   |   | . | . | . |
|   |   |   |
|
|
|
|
Template Sequence |   |
L | S | E | R | E | R | Q | V | L | S | A | V | V | A | G | L | P | N | K | S | I | A | Y | D | L | D | I | S | P | R | T | V | E | V | H | R | A | N | V | M | A | K | M | K | A | K | S | L | P | H | L | V | R | M | . |
. |
. |
A | L | A | G | G | F | G | P |
Template Known Secondary structure |   |
 |
|  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  |  |  | . | . | . |  |  |  |  | T |
|
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  | . | . | . |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
142 | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | |
|
|
. | . | . | . | 200 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|