 |
Job Description | P0A976 | Confidence | 95.92% | Date | Thu Jan 5 11:09:32 GMT 2012 |
Rank | 21 | Aligned Residues | 46 |
% Identity | 17% | Template | d1a62a2 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 1.55 |
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |
|
|
|
|
| . | . | . | . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | S | G | K | G | L | I | T | P | S | D | G | R | . |
. |
. |
. |
. |
I | D | V | Q | L | H | V | S | A | L | N | L | R | D | A | E | E | I | T | T | G | L | R | V | E | F | C | R | I | N | G | L | R | G | P | S |
Query Conservation |   |
  |
|
|
|
|
|
|   |   |   |
|
|   | . | . | . | . | . |   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|   |   |   |   |
|
|   |   |   |
|   |
|
|
|
|
|   |
|   |
|
|
|
|   | . | . | . |
|
|   |
|
|   |
|   |
|   |
|
|   |
|   |   |   |
|
|
Template Sequence |   |
Q | D | G | F | G | F | L | R | S | A | D | S | S | Y | L | A | G | P | D | D | I | Y | V | S | P | S | Q | I | R | R | F | N | . |
. |
. |
L | R | T | G | D | T | I | S | G | K | I | R | P | P | K | E | G | E | R |
Template Known Secondary structure |   |
T | T | S |
|  |  |  |  |
| G | G | G | T | T |
|
|
| T | T |
|  |  |  |
|  |  |  |  |  |  | T | T | . | . | . |
|
| T | T |
|  |  |  |  |  |  |  |
|
|
| T | T |
|
|
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
| . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
59 | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
|
|
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|