Job Description P0A976 Confidence 42.95% Date Thu Jan 5 11:09:32 GMT 2012 Rank 49 Aligned Residues 51 % Identity 20% Template c3h0gS_ PDB info PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase ii subunit rpb7; PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.															.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	K	M	T	G	I	V	K	T	F	D	G	K	S	G	K	G	L	I	T	P	S	D	G	R	I	D	V	Q	L	H	V	S	A	L	N	L	R	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	I	T	T	G	L	R	V	E	F	C	R	I	N
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.			.					.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation															.			.					.	.
Template Sequence		E	V	V	D	A	I	V	T	T	V	N	K	M	.	G	F	.	F	A	N	I	.	.	G	P	L	N	V	F	V	S	S	H	L	V	P	P	D	M	K	F	D	P	T	A	N	P	P	N	Y	S	G	E	D	Q	V	I	E	K	G	S	N	V	R	L	K	I	V	G
Template Known Secondary structure													T	T	.			.				B	.	.	T	T	B						G	G	G	S		T	T				B	S	S	S	S	S		B			S	S	S					S	S
Template Predicted Secondary structure															.			.					.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.		.	100		.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions