Return to main results Retrieve Phyre Job Id

Job DescriptionP0A976
Confidence13.14%DateThu Jan 5 11:09:32 GMT 2012
Rank86Aligned Residues42
% Identity14%Templatec2kjdA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:sodium/hydrogen exchange regulatory cofactor nhe- PDBTitle: solution structure of extended pdz2 domain from nherf1 (150-2 270)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.. .......30.........40.... .....50.
Predicted Secondary structure 



.













...




Query SS confidence 














.





















. . .






Query Sequence  IVKTFDGKSGKGLIT. PSDGRIDVQLHVSALNLRDAEE. . . ITTGLRV
Query Conservation   

     





 .  

  


 
 
 
       ...
  
  
Alig confidence 














.









..









...






Template Conservation   
 
 
   
 

 
       
  
..  
  



   

  

 
Template Sequence  LCTMKKGPSGYGFNLHSDKSKPGQFI. . RSVDPDSPAEASGLRAQDRI
Template Known Secondary structure 

SSS


SSS
S..
TTST

TT
Template Predicted Secondary structure 











..










Template SS confidence 















































   12.......20.........30....... ..40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions