Job Description P0A976 Confidence 61.21% Date Thu Jan 5 11:09:32 GMT 2012 Rank 39 Aligned Residues 62 % Identity 19% Template c1l2fA_ PDB info PDB header:transcription Chain: A: PDB Molecule:n utilization substance protein a; PDBTitle: crystal structure of nusa from thermotoga maritima: a2 structure-based role of the n-terminal domain Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	M	T	G	I	V	K	T	F	D	G	K	S	G	K	G	L	I	T	P	S	D	G	R	I	D	V	Q	L	H	V	S	A	L	N	L	R	D	A	E	E	I	T	T	G	L	R	V	E	F	C	R	I	N	G	L	R	G	P	S	A	A	N	V	Y	L	S
Query Conservation
Alig confidence												.	.										.	.																.	.
Template Conservation												.	.										.	.																.	.
Template Sequence		T	V	T	T	A	E	V	I	R	V	.	.	X	G	E	W	A	D	I	R	I	.	.	G	K	L	E	T	R	L	P	K	K	E	W	I	P	G	.	.	E	E	I	K	A	G	D	L	V	K	V	Y	I	I	D	V	V	K	T	T	K	G	P	K	I	L	V	S
Template Known Secondary structure		S										.	.		S	S							.	.	T	T							G	G	G	S		T	T	.	.					T	T														T	T
Template Predicted Secondary structure												.	.										.	.																.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.			.	.	.	.	.	160	.	.	.	.	.	.	.	.	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions