Job Description P10378 Confidence 100.00% Date Thu Jan 5 11:32:10 GMT 2012 Rank 2 Aligned Residues 509 % Identity 21% Template d1pg4a_ SCOP info Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like Acetyl-CoA synthetase-like Resolution 1.75

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		26	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.							.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure												.	.									.	.	.	.	.	.
Query SS confidence												.	.									.	.	.	.	.	.
Query Sequence		P	L	T	D	I	L	T	R	H	A	.	.	A	S	D	S	I	A	V	I	.	.	.	.	.	.	D	G	E	R	Q	L	S	Y	R	E	L	N	Q	A	A	D	N	L	A	C	S	L	R	R	Q	G	I	K	P	G	E	T	A	L	V	Q	L	G	N	V	A	E	L	Y	I	T	F	F	A	L	L	K	L	G
Query Conservation												.	.									.	.	.	.	.	.
Alig confidence												.	.									.	.	.	.	.	.
Template Conservation
Template Sequence		L	A	A	N	C	L	D	R	H	L	Q	E	N	G	D	R	T	A	I	I	W	E	G	D	D	T	S	Q	S	K	H	I	S	Y	R	E	L	H	R	D	V	C	R	F	A	N	T	L	L	D	L	G	I	K	K	G	D	V	V	A	I	Y	M	P	M	V	P	E	A	A	V	A	M	L	A	C	A	R	I	G
Template Known Secondary structure							T	G	G	G					T	T	S								S	S	T	T																									T			T	T									S	S														T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	P	V	L	A	L	F	S	H	Q	R	S	E	L	N	A	Y	A	S	Q	I	E	P	A	L	L	I	A	D	R	Q	H	A	L	F	S	G	D	D	F	L	N	T	F	V	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	S	S	I	R	V	V	Q	L	L	N	D	S	G	E	H	N
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	H	S	V	I	F	G	G	F	S	P	E	A	V	A	G	C	I	I	D	S	S	S	R	L	V	I	T	A	D	E	G	V	R	A	G	R	S	I	P	L	K	K	N	V	D	D	A	L	K	N	P	N	V	T	S	V	E	H	V	I	V	L	K	R	T	G	S	D	I	D	W	Q	E	G	R	D	L	W
Template Known Secondary structure									T	T	S													T		S						S					T	T					S									T	S	T	T			S									S	S								B	T	T
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		L	Q	D	A	I	N	H	P	A	E	D	F	T	A	T	P	S	P	A	D	E	V	A	Y	F	Q	L	S	G	G	T	T	G	T	P	K	L	I	P	R	T	H	N	D	Y	Y	Y	S	V	R	R	.	S	V	E	I	C	Q	F	T	Q	Q	T	R	Y	L	C	A	I	P	A	A	H	N	Y	A	M	S	S	P
Query Conservation																																																					.
Alig confidence																																																					.
Template Conservation
Template Sequence		W	R	D	L	I	E	K	A	S	P	E	H	Q	P	E	A	M	N	A	E	D	P	L	F	I	L	Y	T	S	G	S	T	G	K	P	K	G	V	L	H	T	T	G	G	Y	L	V	Y	A	A	T	T	F	K	Y	V	F	D	Y	H	P	G	D	I	Y	W	C	T	A	D	V	G	W	V	T	G	H	S	Y	L
Template Known Secondary structure							T	T	S		S									T	T	S										S	S	S	S								S															T	T			T	T							S		T	T	S							T
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		G	S	L	G	V	F	L	A	G	G	T	V	V	L	A	.	.	.	A	D	P	S	A	T	L	C	F	P	L	I	E	K	H	Q	V	N	V	T	A	L	V	P	P	A	V	S	L	W	L	Q	A	L	I	E	G	E	S	R	A	Q	L	A	S	L	K	L	L	Q	V	G	G	A	R	L	S	A	T	L	A	A
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		L	Y	G	P	L	A	C	G	A	T	T	L	M	F	E	G	V	P	N	W	P	T	P	A	R	M	C	Q	V	V	D	K	H	Q	V	N	I	L	Y	T	A	P	T	A	I	R	A	L	M	A	E	G	D	K	A	I	E	G	T	D	R	S	S	L	R	I	L	G	S	V	G	E	P	I	N	P	E	A	W	E
Template Known Secondary structure		T						T	T								S		T	T	S	S	S	T	T										T		S														T	T	G	G	G	G	T	T	T				T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
		319	320	.	.	.	.				.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.			.	.	390	.	.	.
Predicted Secondary structure								.	.	.																																																																.	.
Query SS confidence								.	.	.																																																																.	.
Query Sequence		R	I	P	A	E	I	.	.	.	G	C	Q	L	Q	Q	V	F	G	M	A	E	G	L	V	N	Y	T	R	L	D	D	S	A	E	K	I	I	H	T	Q	G	Y	P	M	C	P	D	D	E	V	W	V	A	D	A	E	G	N	P	L	P	Q	G	E	V	G	R	L	M	T	R	G	.	.	P	Y	T	F	R	G
Query Conservation								.	.	.																																																																.	.
Alig confidence								.	.	.																																																																.	.
Template Conservation
Template Sequence		W	Y	W	K	K	I	G	K	E	K	C	P	V	V	D	T	W	W	Q	T	E	T	G	G	F	M	I	T	P	L	P	G	A	I	E	L	K	A	G	S	A	T	R	P	F	F	G	V	Q	P	A	L	V	D	N	E	G	H	P	Q	E	G	A	T	E	G	N	L	V	I	T	D	S	W	P	G	Q	A	R	T
Template Known Secondary structure							T	T	T	T		S						B			G	G	G	S	S		S	B				T	T	T			B		T	T			B	S	B		T	T								T	T			B			S	S									S			T	T
Template Predicted Secondary structure
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.
		394	.	.	.	.	.	400	.	.	.	.	.			.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		Y	Y	K	S	P	Q	H	N	A	S	A	F	.	.	D	A	N	G	F	Y	C	S	G	D	L	I	S	I	D	P	E	G	Y	I	T	V	Q	G	R	E	K	D	Q	I	N	R	G	G	E	K	I	A	A	E	E	I	E	N	L	L	L	R	H	P	A	V	I	Y	A	A	L	V	S	M	E	D	E	L	M	G
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		L	F	G	D	H	E	R	F	E	Q	T	Y	F	S	T	F	K	N	M	Y	F	S	G	D	G	A	R	R	D	E	D	G	Y	Y	W	I	T	G	R	V	D	D	V	L	N	V	S	G	H	R	L	G	T	A	E	I	E	S	A	L	V	A	H	P	K	I	A	E	A	A	V	V	G	I	P	H	A	I	K	G
Template Known Secondary structure			T	T											S	S	S	T	T	S											T	T	S								S	S	S					T	T															S	T	T												T	T	T
Template Predicted Secondary structure
Template SS confidence
		477	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.
		472	.	.	.	.	.	.	.	480	.	.	.	.	.	.						.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.
Query SS confidence																	.	.	.	.	.
Query Sequence		E	K	S	C	A	Y	L	V	V	K	E	P	L	R	A	.	.	.	.	.	V	Q	V	R	R	F	L	R	E	Q	G	I	A	E	F	K	L	P	D	R	V	E	C	V	D	S	L	P	L	T	A	V	G	K	V	D	K	K	Q	L	R	Q	W	L	A	S	R	A	S
Query Conservation																	.	.	.	.	.
Alig confidence																	.	.	.	.	.											.
Template Conservation																																.
Template Sequence		Q	A	I	Y	A	Y	V	T	L	N	H	G	E	E	P	S	P	E	L	Y	A	E	V	R	N	W	V	R	K	E	.	I	G	P	L	A	T	P	D	V	L	H	W	T	D	S	L	P	K	T	R	S	G	K	I	M	R	R	I	L	R	K	I	A	A	G	D	A	D
Template Known Secondary structure												T	T																			.	T		G	G	G			S						S				B		T	T	S		B											T
Template Predicted Secondary structure																																.
Template SS confidence
		557	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.		.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.