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Job DescriptionP10378
Confidence100.00%DateThu Jan 5 11:32:10 GMT 2012
Rank22Aligned Residues443
% Identity24%Templatec3iplB_
PDB info PDB header:ligaseChain: B: PDB Molecule:2-succinylbenzoate--coa ligase; PDBTitle: crystal structure of o-succinylbenzoic acid-coa ligase from2 staphylococcus aureus subsp. aureus mu50
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30..... ....40.........50.........60.........70.........80.........90.........100....
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Query Sequence  LTDILTRHA. . ASDSIAVIDGERQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVLAL
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Template Sequence  LDFWLYKQAQQNGHHIAITDGQESYTYQNLYCEASLLAKRL. . . KAYQQSRVGLYIDNSIQSIILIHACWLANIEIAMIN
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STTS
SS
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   1........10.........20.........30.........40. ........50.........60.........70.......
 
   105....110.........120.........130.........140.........150.........160.........170.........180....
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Query Sequence  FSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGEHNLQDAINHPAEDFTATPSPADEV
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Template Conservation         
   
       
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Template Sequence  TRLTPNEMTNQMRSIDVQLIFCTLPLELRGF. . . . . . . . . . . . . . . . . . . . . . . . QIVSLDDIEFSPSNILNTSFNLDDI
Template Known Secondary structure  TT

TT

SS



TTS........................T

T




TTS
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   78.80.........90.........100........ .110.........120.........130...
 
   185....190.........200.........210.........220.........230.........240.........250.........260....
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Query Sequence  AYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLC
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Template Sequence  ASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLS. . VLLRAVIEGFTVRIVDKFNAEQI
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SSSS


T


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   164.....170.........180.........190.........200.........210........ .220.........230.........240.
 
   265....270.........280.........290.........300.........310.........320.........330.........340....
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Query Sequence  FPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRL
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Template Sequence  LTMIKNERITHISLVPQTLNWLMQQ. . . . . GLHEPYNLQKILLGGAKLSATMIETA. LQYNLPIYNSFGMTETCSQFLTA
Template Known Secondary structure  TT


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S
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GGGT
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   242.......250.........260...... ...270.........280.........290.. .......300.........310.....
 
   345....350.........360.........370.........380.........390.........400.........410.........420....
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Query Sequence  DDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDLISIDPEGY
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Template Sequence  TPEMLHARPDTVGMPSANVDVKIKNP. . . . . NKEGHGELMIKGANVMNGYLYPTDLTGT. . FENGYFNTGDIAEIDHEGY
Template Known Secondary structure 

TT
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S
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SB
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   316...320.........330.........340. ........350.........360......... 370.........380........
 
   425....430.........440.........450.........460.........470.........480.........490.........500....
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Query Sequence  ITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLP
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Template Sequence  VMIYDRRKDLIISGGENIYPYQIETVAKQFPGISDAVCVGHPDDTWGQVPKLYFVSESDISKAQLIAYLSKH. LAKYKVP
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S
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   389390.........400.........410.........420.........430.........440.........450.........460 .......
 
   505....510..
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Query Sequence  DRVECVDS
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Template Conservation       


Template Sequence  KHFEKVDT
Template Known Secondary structure  S


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   468.470.....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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