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Job DescriptionP10378
Confidence100.00%DateThu Jan 5 11:32:10 GMT 2012
Rank24Aligned Residues461
% Identity23%Templatec3g7sA_
PDB info PDB header:ligaseChain: A: PDB Molecule:long-chain-fatty-acid--coa ligase (fadd-1); PDBTitle: crystal structure of a long-chain-fatty-acid-coa ligase2 (fadd1) from archaeoglobus fulgidus
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30..... ....40...... ...50.........60.........70.........80.........90
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Query Sequence  YWQDLPLTDILTRHA. . ASDSIAVIDGE. . . . . . . . RQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITF
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Template Sequence  YYPKISLADRIDAAAEKFGEKTAIISAEPKFPSEFPESXNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSIDYVXTI
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   13......20.........30.........40.........50.........60.........70.........80.........90..
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  FALLKLGVAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGEHNLQDAINHP
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Template Sequence  YALWRVAATPVPINPXYKSFELEHILNDSEATTLVVHSXLYENFKP. . . . . . VLEKTGVERVFVVGGEVNSLSEVXDSGS
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   93......100.........110.........120.........130........ .140.........150.........160......
 
   171........180.........190.........200.........210.........220.........230.........240.........250
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Query Sequence  AEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAG
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Template Sequence  EDFENVKVNPEEDVALIPYTGGTTGPKGVXLTHFNLAANALQLAVATGLSHXD. . . TIVGCXPXFHSAEFGLVNLXVTVG
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   167..170.........180.........190.........200.........210......... 220.........230.........240...
 
   251........260.........270.........280.........290.........300.........310.........320....
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Query Sequence  GTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGARLSATLAARIPAEI. . . . . .
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Template Sequence  NEYVVXGXFNQEXLAENIEKYKGTFSWAVPPALNVLVNTLESSNKTYDWSYLKVFATGAWPVAPALVEKLLKLAAEKCNN
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   245....250.........260.........270.........280.........290.........300.........310.........320....
 
   325....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  . GCQLQQVFGMAEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFRGYYKSPQHNAS
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Template Sequence  PRLRHNQIWGXTEACPXVTTNPPLRLDKSTTQGVPXSDIELKVISLEDGRELGVGESGEIVIRGPNIFKGYWKREKENQE
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   325....330.........340.........350.........360.........370.........380.........390.........400....
 
   404. ....410.........420.........430.........440.........450.........460.........470.........
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Query Sequence  AF. . . . DANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENLLLRHPAVIYAALVSMEDELMGEKSCAYLV
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Template Sequence  CWWYDEKGRKFFRTGDVGFIDEEGFLHFQDR. . . . . . . . . . . . VPFELEALLXKHEAVXDVAVIGKPDP. . . . . . KAFIV
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   405....410.........420.........430..... ....440.........450.........460. .....
 
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Query Sequence  VKEP. . . . LRAVQVRRFLREQGIAEFKLPDRVECVDSLP
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Template Sequence  LKPEYRGKVDEEDIIEWVRER. I. . . . . SREVEFVEELP
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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