Job Description P10378 Confidence 15.31% Date Thu Jan 5 11:32:10 GMT 2012 Rank 86 Aligned Residues 71 % Identity 14% Template c2uv0G_ PDB info PDB header:transcription Chain: G: PDB Molecule:transcriptional activator protein lasr; PDBTitle: structure of the p. aeruginosa lasr ligand-binding domain2 bound to its autoinducer Resolution 1.8 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	R	W	P	E	E	F	A	R	R	Y	R	E	K	G	Y	W	Q	D	L	P	L	T	D	I	L	T	R	H	A	A	S	D	S	I	A	V	I	D	G	E	R	Q	L	S	Y	R	E	L	N	Q	A	A	D	N	L	A	C	S	L	R	R	Q	G	I	K	P	G	E	T	A	L	V	Q	L	G	N	V
Query Conservation
Alig confidence																																.	.	.														.	.	.	.	.
Template Conservation																																.	.	.														.	.	.	.	.
Template Sequence		V	G	N	Y	P	A	A	W	R	E	H	Y	D	R	A	G	Y	A	R	V	D	P	T	V	S	H	C	T	Q	S	.	.	.	V	L	P	I	F	W	E	P	S	I	Y	Q	T	.	.	.	.	.	R	K	Q	H	E	F	F	E	E	A	S	A	A	G	L	V	Y	G	L	T	X	P	L	H	G	A	R	G
Template Known Secondary structure					S											T	T	G	G	G	T											.	.	.	S	S						G	G	G			S	.	.	.	.	.													T	T		S										T	T	S
Template Predicted Secondary structure																																.	.	.														.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions