Job Description P10378 Confidence 29.52% Date Thu Jan 5 11:32:10 GMT 2012 Rank 59 Aligned Residues 84 % Identity 17% Template c2jx2A_ PDB info PDB header:transcription Chain: A: PDB Molecule:negative elongation factor e; PDBTitle: solution conformation of rna-bound nelf-e rrm Resolution UNK

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		430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	K	D	Q	I	N	R	G	G	E	K	I	A	A	E	E	I	E	N	L	L	L	R	H	P	A	V	I	Y	A	A	L	V	S	M	E	D	E	L	M	G	E	K	S	C	A	Y	L	V	V	K	E	P	L	R	A	V	Q	V	R	R	F	L	R	E	Q	G	I	A	E	F	K	L	P	D	R	V	E	C
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.
Template Sequence		R	K	G	N	T	L	Y	V	Y	G	E	D	M	T	P	T	L	L	R	G	A	F	S	P	F	G	N	I	I	D	L	S	M	.	.	.	.	.	.	.	D	P	P	R	N	C	A	F	V	T	Y	E	K	M	E	S	A	D	Q	A	V	A	E	L	N	G	T	Q	V	E	S	V	Q	L	K	V	N	I	A	R
Template Known Secondary structure				B								S	S											T	T	T									.	.	.	.	.	.	.		T	T	T	T							S	S												T	T				S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.								70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		510	.	.	.	.	.	.	.	.	.	520
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	S	L	P	L	T	A	V	G	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	P	M	L	D	A	A	T	G	K
Template Known Secondary structure				T	T	T	T	B			S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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