Job Description P10378 Confidence 100.00% Date Thu Jan 5 11:32:10 GMT 2012 Rank 12 Aligned Residues 508 % Identity 18% Template c2d1tA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:luciferin 4-monooxygenase; PDBTitle: crystal structure of the thermostable japanese firefly2 luciferase red-color emission s286n mutant complexed with3 high-energy intermediate analogue Resolution 1.45 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.					.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure															.	.												.	.	.	.
Query SS confidence															.	.												.	.	.	.
Query Sequence		Q	D	L	P	L	T	D	I	L	T	R	H	A	.	.	A	S	D	S	I	A	V	I	D	G	E	.	.	.	.	R	Q	L	S	Y	R	E	L	N	Q	A	A	D	N	L	A	C	S	L	R	R	Q	G	I	K	P	G	E	T	A	L	V	Q	L	G	N	V	A	E	L	Y	I	T	F	F	A	L	L	K	L
Query Conservation															.	.												.	.	.	.
Alig confidence															.	.												.	.	.	.													.
Template Conservation																																												.
Template Sequence		E	E	G	S	A	G	T	Q	L	R	K	Y	M	E	R	Y	A	K	L	G	A	I	A	F	T	N	A	V	T	G	V	D	Y	S	Y	A	E	Y	L	E	K	S	.	C	L	G	K	A	L	Q	N	Y	G	L	V	V	D	G	R	I	A	L	C	S	E	N	C	E	E	F	F	I	P	V	I	A	G	L	F	I
Template Known Secondary structure			S	S																	T							T	T	T														.										T			T	T								S	S		T	T	T
Template Predicted Secondary structure																																												.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170
Predicted Secondary structure																																																																										.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.
Query Sequence		G	V	A	P	V	L	A	L	F	S	H	Q	R	S	E	L	N	A	Y	A	S	Q	I	E	P	A	L	L	I	A	D	R	Q	H	A	L	F	S	G	D	D	F	L	N	T	F	V	T	E	H	S	S	I	R	V	V	Q	L	L	N	D	S	G	E	H	N	L	Q	D	A	I	N	.	.	.	.	.	.	H	P
Query Conservation																																																																										.	.	.	.	.	.
Alig confidence																																																																										.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	G	V	A	P	T	N	E	I	Y	T	L	R	E	L	V	H	S	L	G	I	S	K	P	T	I	V	F	S	S	K	K	G	L	D	K	V	I	T	V	Q	K	T	V	T	T	I	K	T	I	V	I	L	D	S	K	V	D	Y	R	G	Y	Q	C	L	D	T	F	I	K	R	N	T	P	P	G	Y	Q	A
Template Known Secondary structure		T								T	T	S															S						T	T	T											S	T	T							T	T		S	S		B	T	T	B		B								T	S		T	T			G
Template Predicted Secondary structure
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence		A	E	D	F	T	A	T	P	S	P	A	D	E	V	A	Y	F	Q	L	S	G	G	T	T	G	T	P	K	L	I	P	R	T	H	N	D	Y	Y	Y	S	V	R	R	S	V	E	I	C	Q	F	T	Q	.	Q	T	R	Y	L	C	A	I	P	A	A	H	N	Y	A	M	S	S	P	G	S	L	G	V	F	L	A
Query Conservation																																																						.
Alig confidence																																																						.
Template Conservation
Template Sequence		S	S	F	K	T	V	E	V	D	R	K	E	Q	V	A	L	I	M	N	S	S	G	S	T	G	L	P	K	G	V	Q	L	T	H	E	N	I	V	T	R	F	S	H	A	R	D	P	I	Y	G	N	Q	V	S	P	G	T	A	V	L	T	V	V	P	F	H	H	G	F	G	M	F	T	T	L	G	Y	L	I	C
Template Known Secondary structure		G	G								T	T	T	S								S	S		S	S	S																			T		T	T	T	S					T	T							S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	T	V	V	L	A	A	D	P	S	A	T	L	C	F	P	L	I	E	K	H	Q	V	N	V	T	A	L	V	P	P	A	V	S	L	W	L	Q	A	L	I	E	G	E	S	R	A	Q	L	A	S	L	K	L	L	Q	V	G	G	A	R	L	S	A	T	L	A	A	R	I	P	A	E	I	G	C	Q	L	Q
Query Conservation
Alig confidence																																																.	.
Template Conservation																																																.	.
Template Sequence		G	F	R	V	V	M	L	T	K	F	D	E	E	T	F	L	K	T	L	Q	D	Y	K	C	T	N	V	I	L	V	P	T	L	F	A	I	L	N	K	S	E	L	L	N	K	Y	.	.	D	L	S	N	L	V	E	I	A	S	G	G	A	P	L	S	K	E	V	G	E	A	V	A	R	R	F	N	L	P	G	V
Template Known Secondary structure		T																					T	T								G	G	G								S		G	G	G	S	.	.			T	T								S	S														T	T		S
Template Predicted Secondary structure																																																.	.
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	V	F	G	M	A	E	G	L	V	N	Y	T	R	L	D	D	S	A	E	K	I	I	H	T	Q	G	Y	P	M	C	P	D	D	E	V	W	V	A	D	A	E	G	N	P	L	P	Q	G	E	V	G	R	L	M	T	R	G	P	Y	T	F	R	G	Y	Y	K	S	P	Q	H	N	A	S	A	F	D	A	N	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	Q	G	Y	G	L	T	E	T	T	S	A	I	I	I	T	P	E	G	D	D	K	P	G	A	S	G	K	V	V	P	L	F	K	A	K	V	I	D	L	D	T	K	K	S	L	G	P	N	R	R	G	E	V	C	V	K	G	P	M	L	M	K	G	Y	V	N	N	P	E	A	T	K	E	L	I	D	E	E	G
Template Known Secondary structure								G	G	G	S	S							T	T				T	T			B				T	T								T	T	T			B			T	T									S	T	T	S		S			T	T									B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.			.	.	.	.
Predicted Secondary structure																																																																												.	.
Query SS confidence																																																																												.	.
Query Sequence		F	Y	C	S	G	D	L	I	S	I	D	P	E	G	Y	I	T	V	Q	G	R	E	K	D	Q	I	N	R	G	G	E	K	I	A	A	E	E	I	E	N	L	L	L	R	H	P	A	V	I	Y	A	A	L	V	S	M	E	D	E	L	M	G	E	K	S	C	A	Y	L	V	V	K	E	P	.	.	L	R	A	V
Query Conservation																																																																												.	.
Alig confidence																																																																												.	.
Template Conservation
Template Sequence		W	L	H	T	G	D	I	G	Y	Y	D	E	E	K	H	F	F	I	V	D	R	L	K	S	L	I	K	Y	K	G	Y	Q	V	P	P	A	E	L	E	S	V	L	L	Q	H	P	S	I	F	D	A	G	V	A	G	V	P	D	P	V	A	G	E	L	P	G	A	V	V	V	L	E	S	G	K	N	M	T	E	K
Template Known Secondary structure													T	T									G	G	G		B		B	T	T			B											T	S	T	T												T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		419	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.
		488	.	490	.	.	.	.	.	.	.	.	.	500	.		.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		Q	V	R	R	F	L	R	E	Q	G	I	A	E	F	.	K	L	P	D	R	V	E	C	V	D	S	L	P	L	T	A	V	G	K	V	D	K	K	Q	L	R	Q	W	L	A	S	R	A
Query Conservation																.
Alig confidence											.					.
Template Conservation											.
Template Sequence		E	V	M	D	Y	V	A	S	Q	.	V	S	N	A	K	R	L	R	G	G	V	R	F	V	D	E	V	P	K	G	L	T	G	K	I	D	G	R	A	I	R	E	I	L	K	K	P	V
Template Known Secondary structure									T	T	.	S		G	G	G	S		T	T						S	S			B		T	T	S		B											S
Template Predicted Secondary structure											.
Template SS confidence
		499	500	.	.	.	.	.	.	.		.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.