Return to main results Retrieve Phyre Job Id

Job DescriptionP69931
Confidence99.54%DateThu Jan 5 12:12:24 GMT 2012
Rank75Aligned Residues198
% Identity12%Templated1r6bx3
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  FASFWPGDNSSLLAALQNVLRQ. . . . . . . . EHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTW. . . . . .
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Template Sequence  LKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIG
Template Known Secondary structure  TTTS
S
TT
S
TTS
S
STTSST
GGG
SSSS

SSS

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Query Sequence  . . . . . . . . . . . FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNR. . . . . . . . . ILESGKTRLLITGDRPPRQLN
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Template Sequence  APPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAH. . PDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRAME
Template Known Secondary structure 

S
STT
SSTGGGS
..STTT
TT
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Query Sequence  LGLPDLASRL. . DWGQIYKLQPLSDEDKLQALQLRARL. . . . . . . . . RGFELPEDVGRFLLKR. . . LDREMRTLFMTLDQ
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Template Conservation              
    
       
    
    
                       
         
 
 
   
  
Template Sequence  EIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQD
Template Known Secondary structure  S
TT
S




TT

BTTTBTTT
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   211.......
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Query Sequence  LDRASITA
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Template Sequence  NLKKPLAN
Template Known Secondary structure  T
Template Predicted Secondary structure 
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   711.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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