Return to main results Retrieve Phyre Job Id

Job DescriptionP69931
Confidence99.66%DateThu Jan 5 12:12:24 GMT 2012
Rank58Aligned Residues218
% Identity18%Templated1ofha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.. .......30.........40. ........50.........60.........70..
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Query Sequence  LYLPDDETFASF. . . . WPGDNSSLLAALQNVLRQE. . . . . . . . . . . . . . HSGYIYLWAREGAGRSHLLHAACAELSQRGD
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Template Sequence  SEMTPR. EIVSELDQHIIGQ. ADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFI
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.TT

S
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TTSST

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   2..... ..10.........20 .........30.........40.........50.........60.........70.........
 
   73......80... ......90.........100.........110 .........120.....
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Query Sequence  AVGYVPLDKRT. . . . . . . . . . . . . . WFVPEVLDGMEHLSLVCIDNIECIAGD. . . . . . . . . . ELWEMAIFDLYNRIL. . .
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Template Sequence  KVEATKFTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVST
Template Known Secondary structure  GGGGSS

SGGGSTTTTTT


GGGGS

SS

SS

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   80.........90.........100.........110.........120.........130.........140.........150.........
 
   126...130.........140.........150.........160.........170..... ....180.......
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Query Sequence  . . . . . ESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQ. . . . . . . . . . . . . LRARLRGFELPE
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Template Sequence  KHGMVKTDHILFIASGAFQVARPSDLIPELQGRLP. . IRVELTALSAADFERILTEPHASLTEQYKALMATEGVNIAFTT
Template Known Secondary structure  TT
TT


SSS
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   294.....300.........310.........320........ .330.........340.........350.........360.........370.
 
   188.190...... ...200.........210.........220. ........230..
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Query Sequence  DVGRFLLKR. . . . . . . . LDREMRTLFMTLDQLDRASITAQRK. . . . . . . LTIPFVKEILK
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Template Conservation    
  
                
 
   
                    
    
   
 
Template Sequence  DAVKKIAEAAFRVNEKTENIGARRLHTVMERLMDKISFSASDMNGQTVNIDAAYVADALG
Template Known Secondary structure  S


TTSGGG
TT

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   372.......380.........390.........400.........410.........420.........430.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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