Return to main results Retrieve Phyre Job Id

Job DescriptionP69931
Confidence99.82%DateThu Jan 5 12:12:24 GMT 2012
Rank29Aligned Residues211
% Identity16%Templated1ixza_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40 .........50.........60.........70.........80.
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Query Sequence  PDDETFASFWPGDNSSLLAALQNVLRQ. . . . . . . . . . . . EHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDK
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Template Sequence  APKVTFKDVAG. . AEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVAGEARVPFITASGSDFVE
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S

GGG

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TT



S

TTSSTT

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   150.........160 .........170.........180.........190.........200.........210.........220.......
 
   82.......90.. .......100.........110.. .......120.........130.........140.........150.
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Query Sequence  RTWFVPEVLDG. . . . . . . MEHLSLVCIDNIECIAGDEL. . . WEMAIFDLYNRILESGKTRLLITGDRPPRQLNLGLPDLA
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Template Sequence  MFVGVGAARVRDLFETAKRHAPCIVFIDEIDAVGRNDEREQTLNQLLVEMDGFEKDTAIVVMAATNRPDILDPAL. . . . L
Template Known Secondary structure  S
TTTTSSST

T

TT

S
GGGS
GGG....G
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   228.230.........240.........250.........260.........270.........280.........290.........300.. .
 
   152.......160.........170.........180.........190......... 200.........210.........220. ........
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Query Sequence  SRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDR. EMRTLFMTLDQLDRASITAQRK. LTIPFVKE
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Template Sequence  RPGRFDRQIAIDAPDVKGREQILRIHARGKPLAEDVD. LALLAKRTPGFVGADLENLLNEAALLAAREGRRKITMKDLEE
Template Known Secondary structure  STTSS


S

TTS
B
TT

.T
TT

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   313......320.........330.........340......... 350.........360.........370.........380.........390.
 
   230.
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Query Sequence  IL
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Template Sequence  AA
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 

   392.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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