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Job DescriptionP69931
Confidence99.58%DateThu Jan 5 12:12:24 GMT 2012
Rank67Aligned Residues213
% Identity18%Templated1g8pa_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   14.....20.........30.........40.........50.........60.....
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Query Sequence  PDDETFASFWPGDNSSLLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACA. . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RPVFPFSA. IVGQ. EDMKLALLLTAVDPGIGGVLVFGDRGTGKSTAVRALAALLPEIEAVEGCPVSSPNVEMIPDWATVL
Template Known Secondary structure 




GGG.S
S
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GGG



GGG
TTS

TT
TT

SSGGGS
TT


S
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   18.20..... .... 30.........40.........50.........60.........70.........80.........90.....
 
   66...70.........80......... 90.........100.........110.........120......
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Query Sequence  . . ELSQRGDAVGYVPLDKRTWFVPEV. . . . . . . . . . . . . . . . . LDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILE
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Template Sequence  STNVIRKPTPVVDLPLGVSEDRVVGALDIERAISKGEKAFEPGLLARANRGYLYIDECNLLE. . DHIVDLLLDVAQSGEN
Template Known Secondary structure 






TT




GGG

TTTTGGGS
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   96...100.........110.........120.........130.........140.........150....... ..160.........170...
 
   127..130.........140.........150.........160.........170.........180.
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Query Sequence  . . . . . . . . . . SGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLR. . . . . . . . . . . . . . .
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Template Sequence  VVERDGLSIRHPARFVLVGSGNPEEGD. . LRPQLLDRFG. LSVEVLSPRDVETRVEVIRRRDTYDADPKAFLEEWRPKDM
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TT




S
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   174.....180.........190.........200 .........210 .........220.........230.........240.........250
 
   182.......190...... ...200.........210.........220. ........230...
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Query Sequence  . . . . . . . . . . . . . . GFELPEDVGRFLLKR. . . . LDREMRTLFMTLDQLDRASITAQRK. LTIPFVKEILKL
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Template Sequence  DIRNQILEARERLPKVEAPNTALYDCAALCIALGSDGLRGELTLLRSARALAALEGATAVGRDHLKRVATM
Template Known Secondary structure  GGG
B

SSS
STT
SB

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   251........260.........270.........280.........290.........300.........310.........320.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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