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Job Description | P69931 | Confidence | 95.99% | Date | Thu Jan 5 12:12:24 GMT 2012 |
Rank | 472 | Aligned Residues | 80 |
% Identity | 18% | Template | c3tmiA_ |
PDB info |
PDB header:hydrolase/rna | Chain: A: PDB Molecule:atp-dependent rna helicase ddx58; |
PDBTitle: structural basis for rna recognition and activation of rig-i
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Resolution | 2.90 Å |
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42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
H | S | G | Y | I | Y | L | W | A | R | E | G | A | G | R | S | H | L | L | H | A | A | C | A | E | L | . |
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S | Q | R | G | D | A | V | G | Y | V | P | L | D | K | R | T | W | F | V | P | E | V | L | D | G | M | E | H | . |
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Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
K | G | K | N | T | I | I | C | A | P | T | G | C | G | K | T | F | V | S | L | L | I | C | E | H | H | L | K | K | F | P | Q | G | Q | K | G | K | V | V | F | F | A | N | Q | I | P | V | Y | E | Q | Q | K | S | V | F | S | K | Y | F | E | R | H | G | Y | R | V | T | G | I | S | G | A | T | A | E | N | V | P | V | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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256 | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . |
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96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
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L | S | L | V | C | I | D | N | I | E | C | I | A | G | D | E | L | W | E | M | A | I | F | D | L | Y |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
Q | I | V | E | N | N | D | I | I | I | L | T | P | Q | I | L | V | N | N | L | K | K | G | T | I | P | S | L | S | I | F | T | L | M | I | F | D | E | C | H | N | T | S | K | Q | H | P | Y | N | M | I | M | F | N | Y | L |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
336 | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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