Job Description P69931 Confidence 99.61% Date Thu Jan 5 12:12:24 GMT 2012 Rank 64 Aligned Residues 192 % Identity 16% Template c3pxiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc Resolution 6.93 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																																															.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.																																															.	.	.	.
Query Sequence		F	A	S	F	W	P	G	D	N	S	S	L	L	A	A	L	Q	N	V	L	R	.	.	.	.	.	.	.	.	.	Q	E	H	S	G	Y	I	Y	L	W	A	R	E	G	A	G	R	S	H	L	L	H	A	A	C	A	E	L	S	Q	R	G	D	A	V	G	Y	V	P	L	D	K	R	T	W	F	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.																																															.	.	.	.
Alig confidence										.													.	.	.	.	.	.	.	.	.																																															.	.	.	.
Template Conservation										.
Template Sequence		L	H	S	R	V	I	G	Q	.	D	E	A	V	V	A	V	A	K	A	V	R	R	A	R	A	G	L	K	D	P	K	R	P	I	G	S	F	I	F	L	G	P	T	G	V	G	K	T	E	L	A	R	A	L	A	E	S	I	F	G	D	E	E	S	M	I	R	I	D	M	S	E	Y	M	E	K	H	S	T	S
Template Known Secondary structure				T	T	S		S		.															T	T	T		S		T	T	S		S							S		T	T	S	S														S		T	T							G	G	G	G		S	S
Template Predicted Secondary structure										.
Template SS confidence
		506	.	.	.	510	.	.	.		.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.									.	.	.	150	.	.	.
Predicted Secondary structure																																												.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence																																												.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		V	P	E	V	L	D	G	M	E	H	L	S	L	V	C	I	D	N	I	E	C	I	A	G	D	E	L	W	E	M	A	I	F	D	L	Y	N	R	I	L	E	S	.	.	.	.	G	K	T	R	L	L	I	T	G	D	R	P	P	R	Q	L	N	L	G	.	.	.	.	.	.	.	.	L	P	D	L	A	S	R
Query Conservation																																												.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence										.															.	.																		.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation										.															.	.
Template Sequence		L	T	E	K	V	R	R	K	.	P	Y	S	V	V	L	L	D	A	I	E	K	A	H	.	.	P	D	V	F	N	I	L	L	Q	V	L	E	D	G	R	L	T	T	V	D	F	R	N	T	I	L	I	M	T	S	N	V	G	A	S	E	K	D	K	V	M	G	E	L	K	R	A	F	R	P	E	F	I	N	R
Template Known Secondary structure										.	S	S	S							G	G	G	S		.	.														S	B					B		T	T								S	S	S	T	T													S						T	T
Template Predicted Secondary structure										.															.	.
Template SS confidence
		602	.	.	.	.	.	.	.		610	.	.	.	.	.	.	.	.	.	620	.	.	.			.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.										.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		L	D	W	G	Q	I	Y	K	L	Q	P	L	S	D	E	D	K	L	Q	A	L	Q	L	R	A	R	L	R	.	.	.	.	.	.	.	.	.	G	F	E	L	P	E	D	V	G	R	F	L	L	K	R	.	.	.	L	D	R	E	M	R	T	L	F	M	T	L	D	Q	L	D	R	A	S	I	T	A
Query Conservation																														.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence										.	.	.	.																	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation										.	.	.	.
Template Sequence		I	D	E	I	I	V	F	H	.	.	.	.	E	K	K	H	L	T	E	I	V	S	L	M	S	D	Q	L	T	K	R	L	K	E	Q	D	L	S	I	E	L	T	D	A	A	K	A	K	V	A	E	E	G	V	D	L	E	Y	G	A	R	P	L	R	R	A	I	Q	K	H	V	E	D	R	L	S	E
Template Known Secondary structure		S	S							.	.	.	.																						T	T	T															G	G	G			T	T	T	T	T	T	T									T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		705	.	.	.	.	710	.	.					.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions