Job Description P69931 Confidence 99.47% Date Thu Jan 5 12:12:24 GMT 2012 Rank 81 Aligned Residues 187 % Identity 15% Template c3pxgA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca121 and clpc1-485 complex Resolution 3.65 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.
Predicted Secondary structure																																																			.	.																								.	.
Query SS confidence																																																			.	.																								.	.
Query Sequence		W	P	G	D	N	S	S	L	L	A	A	L	Q	N	V	L	R	Q	E	H	S	G	Y	I	Y	L	W	A	R	E	G	A	G	R	S	H	L	L	H	A	A	C	A	E	L	S	Q	R	G	.	.	D	A	V	G	Y	V	P	L	D	K	R	T	W	F	V	P	E	V	L	D	G	M	E	.	.	H	L	S	L
Query Conservation																																																			.	.																								.	.
Alig confidence															.																																				.	.																								.	.
Template Conservation															.
Template Sequence		V	I	G	R	S	K	E	I	Q	R	V	I	E	.	V	L	S	R	R	T	K	N	N	P	V	L	I	G	E	P	G	V	G	K	T	A	I	A	E	G	L	A	Q	Q	I	I	N	N	E	V	P	E	I	L	R	D	K	R	V	M	T	L	E	D	R	L	K	K	V	M	D	E	I	R	Q	A	G	N	I	I
Template Known Secondary structure															.					S	S	S							S		T	T	T	T	T													S	S		S		T	T	T	S	S								T	T										T
Template Predicted Secondary structure															.
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		V	C	I	D	N	I	E	C	I	A	G	D	E	L	W	E	M	A	I	F	D	L	Y	N	R	I	L	E	S	G	K	T	R	L	L	I	T	G	D	R	P	P	.	R	Q	L	N	L	G	L	P	D	L	A	S	R	L	D	W	G	Q	I	Y	K	L	Q	P	L	S	D	E	D	K	L	Q	A	L	Q	L	R
Query Conservation																																												.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.																.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template Sequence		L	F	I	D	A	K	P	S	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	L	Q	C	I	G	A	T	T	L	D	E	Y	R	K	Y	I	E	K	D	A	A	L	E	R	R	F	Q	.	.	.	P	I	Q	V	D	Q	P	S	V	D	E	S	I	Q	I	L	Q	G	L
Template Known Secondary structure										T	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S									T	T	T	T					T	T		S					S			.	.	.																			T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.																			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.				.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		178	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.							.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure					.	.	.	.																							.	.	.	.	.	.																		.	.
Query SS confidence					.	.	.	.																							.	.	.	.	.	.																		.	.
Query Sequence		A	R	L	.	.	.	.	R	G	F	E	L	P	E	D	V	G	R	F	L	L	K	R	L	D	R	E	M	R	.	.	.	.	.	.	T	L	F	M	T	L	D	Q	L	D	R	A	S	I	T	A	Q	.	.	R	K	L	T	I	P	F	V	K	E	I	L
Query Conservation					.	.	.	.																							.	.	.	.	.	.																		.	.
Alig confidence					.	.	.	.																							.	.	.	.	.	.																		.	.
Template Conservation
Template Sequence		R	D	R	Y	E	A	H	H	R	V	S	I	T	D	D	A	I	E	A	A	V	K	L	S	D	R	Y	I	S	D	R	F	L	P	D	K	A	I	D	L	I	D	E	A	G	S	K	V	R	L	R	S	F	T	T	P	P	N	L	K	E	L	E	Q	K	L
Template Known Secondary structure		T	T	T	S	G	G	G	S	S		S																S	S			S		T	T																		T	T	S			S	S	T
Template Predicted Secondary structure
Template SS confidence
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions