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Job DescriptionP69931
Confidence96.13%DateThu Jan 5 12:12:24 GMT 2012
Rank462Aligned Residues96
% Identity9%Templatec3fmoB_
PDB info PDB header:oncoprotein/hydrolaseChain: B: PDB Molecule:atp-dependent rna helicase ddx19b; PDBTitle: crystal structure of the nucleoporin nup214 in complex with the dead-2 box helicase ddx19
Resolution2.51 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60...... ...70.........80.........90.....
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Query Sequence  QEHSGYIYLWAREGAGRSHLLHAACAE. . . . . LSQRGDAVGYVPLDKRTWFVPEVLDGMEH. . . . . . . . . . . . . . . . . . .
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Template Sequence  AEPPQNLIAQSQSGTGKT. AAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERG
Template Known Secondary structure  SSS




TTSS.

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SSTTTSTT

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   128.130.........140..... ....150.........160.........170.........180.........190.........200......
 
   96...100.........110.........120.........130......
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITG
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Template Sequence  QKISEQIVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSAT
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GGG
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   207..210.........220.........230.........240.........250.........260.........270......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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