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Job DescriptionP69931
Confidence97.17%DateThu Jan 5 12:12:24 GMT 2012
Rank296Aligned Residues117
% Identity9%Templatec3dkpA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:probable atp-dependent rna helicase ddx52; PDBTitle: human dead-box rna-helicase ddx52, conserved domain i in complex with2 adp
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50....... ..60.........70.........80.........90.....
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Query Sequence  HSGYIYLWAREGAGRS. . HLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDGMEH. . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  HGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGP
Template Known Secondary structure  TT



TTS

S

SSS


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TTTST
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   201........210.........220.........230.........240.........250.........260.........270.........280
 
   96...100.........110.........120.........130.........140....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLN
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Template Sequence  KSSKKFDILVTTPNRLIYLLKQDPPGIDLASVEWLVVDESDKLFEDGGFRDQLASIFLACTSHKVRRAMFSATFAYDVEQ
Template Known Secondary structure  TS





SSS
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TT

SS




TT
SS

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   281........290.........300.........310.........320.........330.........340.........350.........360
 
   145....150........
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Query Sequence  LGLPDLASRLDWGQ
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Template Sequence  WCKLNLDNVISVSI
Template Known Secondary structure  SSS
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   363......370......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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