Return to main results Retrieve Phyre Job Id

Job DescriptionP69931
Confidence97.11%DateThu Jan 5 12:12:24 GMT 2012
Rank314Aligned Residues104
% Identity16%Templatec3d31B_
PDB info PDB header:transport proteinChain: B: PDB Molecule:sulfate/molybdate abc transporter, atp-binding PDBTitle: modbc from methanosarcina acetivorans
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80..
Predicted Secondary structure 

















......................................
Query SS confidence 









































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Sequence  EHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Query Conservation       


 

 




 

 


         
        ......................................
Alig confidence 









































......................................
Template Conservation    


  
 
 








  
 
   
  
 
 
 
                                          
Template Sequence  ESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPEKHDIAFVYQNYSLFPHMNVKKNLEFGMRMKKIK
Template Known Secondary structure 
TT



TTSS

STT
TTS
T

TT



TTS



Template Predicted Secondary structure 

















































Template SS confidence 















































































   24.....30.........40.........50.........60.........70.........80.........90.........100...
 
   83......90.........100.........110.........120.........130...
Predicted Secondary structure  .............................
















Query SS confidence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . .


















































Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TWFVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLL
Query Conservation  .............................               

 



  
         
   
           
Alig confidence  .............................























.

























Template Conservation                          

 
  


 




   
 






 
. 

      
   
  
    
 


Template Sequence  DPKRVLDTARDLKIEHLLDRNPLTLSGGEQQRVALARALVTNPKILLLDEPLS. ALDPRTQENAREMLSVLHKKNKLTVL
Template Known Secondary structure 
TT
TTTTTS
GGGS
TTS

SSSST.TS
TT
Template Predicted Secondary structure 































.





Template SS confidence 















































































   104.....110.........120.........130.........140.........150...... ...160.........170.........180..
 
   134.....140.....
Predicted Secondary structure 

Query SS confidence 











Query Sequence  ITGDRPPRQLNL
Query Conservation              
Alig confidence 











Template Conservation   



  
    
Template Sequence  HITHDQTEARIM
Template Known Secondary structure  S
Template Predicted Secondary structure 

Template SS confidence 











   183......190....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions