Return to main results Retrieve Phyre Job Id

Job DescriptionP69931
Confidence96.65%DateThu Jan 5 12:12:24 GMT 2012
Rank411Aligned Residues133
% Identity11%Templatec2ze5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:isopentenyl transferase; PDBTitle: crystal structure of adenosine phosphate-isopentenyltransferase
Resolution2.31 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........70.........80.... .....90.........100.........110.........120
Predicted Secondary structure 













.....








Query SS confidence 






































. . . . .



































Query Sequence  IYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTW. . . . . FVPEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDL
Query Conservation 


 

 




 

 


         
          .....             

 



  
         
   
Alig confidence 






































.....



































Template Conservation   

 







 


 

     



 

 


  
 





   
   
 



    
 
   
   
   
   
Template Sequence  HLIYGPTCSGKTDMAIQIAQETGWPVVALDRVQCCPQIATGSGRPLESELQSTRRIYLDSRPLTEGILDAESAHRRLIFE
Template Known Secondary structure 
SSSSS




SGGG
GGGTTTTT


TGGGTT


S



GGG
S

Template Predicted Secondary structure 


































Template SS confidence 















































































   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   121........130.........140.........150.........160.........170.........180
Predicted Secondary structure 





















Query SS confidence 



























































Query Sequence  YNRILESGKTRLLITGDRPPRQLNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARL
Query Conservation 
           
                                               
Alig confidence 








.
.















































Template Conservation 
  
   
 . .





  
  

                               
   
Template Sequence  VDWRKSEEG. L. ILEGGSISLLNCMAKSPFWRSGFQWHVKRLRLGDSDAFLTRAKQRVAE
Template Known Secondary structure  TTTTSS..


GGGGSS





Template Predicted Secondary structure 


..

















Template SS confidence 



























































   84.....90.. . ......100.........110.........120.........130.........140.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions