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Job DescriptionP69931
Confidence99.54%DateThu Jan 5 12:12:24 GMT 2012
Rank72Aligned Residues156
% Identity12%Templatec2w58B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:primosome component (helicase loader); PDBTitle: crystal structure of the dnai
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20....... ..30.........40 .........50.........60.........70.........
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Query Sequence  QLSLPLYLPDDETFASFWPGDN. . SSLLAALQNVLRQ. . . . EHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPL
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Template Sequence  SMFMPREILR. ASLSDVDLNDDGRIKAIRFAERFVAEYEPGKKMKGLYLHGSFGVGKTYLLAAIANELAKRNVSSLIVYV
Template Known Secondary structure  SS
GGG

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SSS



STTT

TT




SSSSSSS


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   11191120........ .1130.........1140.........1150.........1160.........1170.........1180.........1190.......
 
   80...... ...90.........100.........110.........120.........130.........140......
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Query Sequence  DKRTWFV. . . . . . . . . PEVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNLG. . . .
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Template Sequence  PELFRELKHSLQDQTMNEKLDYIKKVPVLMLDDLGAEASSWVRDDVFGPILQYRMFENLPTFFTSNFDMQQLAHHLTYEE
Template Known Secondary structure  TTT
SSST
SS
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TTT

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T


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   1198.1200.........1210.........1220.........1230.........1240.........1250.........1260.........1270.......
 
   147..150.... .....160..
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Query Sequence  . . . . LPDLASRL. DWGQIYKL
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Template Sequence  EKVKAARIMERIRYLAYPIEI
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   1283......1290.........1300...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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