Job Description P69931 Confidence 97.85% Date Thu Jan 5 12:12:24 GMT 2012 Rank 138 Aligned Residues 171 % Identity 8% Template c2gnoA_ PDB info PDB header:replication Chain: A: PDB Molecule:dna polymerase iii, gamma subunit-related protein; PDBTitle: crystal structure of a dna polymerase iii, gamma subunit-related2 protein (tm0771) from thermotoga maritima msb8 at 2.00 a resolution Resolution 2.00 Å

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.							70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.																													.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.																													.	.	.	.	.
Query Sequence		S	L	L	A	A	L	Q	N	V	L	R	Q	E	H	S	G	Y	I	Y	L	W	A	R	E	G	A	G	R	S	H	L	L	H	A	A	C	A	E	L	S	Q	.	.	.	.	.	.	R	G	D	A	V	G	Y	V	P	L	D	K	R	T	W	F	V	P	E	V	L	D	G	M	E	H	L	S	.	.	.	.	.
Query Conservation																																											.	.	.	.	.	.																													.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.																													.	.	.	.	.
Template Conservation
Template Sequence		D	Q	L	E	T	L	K	R	I	I	E	K	S	E	G	I	S	I	L	I	N	G	E	D	L	S	Y	P	R	E	V	S	L	E	L	P	E	Y	V	E	K	F	P	P	K	A	S	D	V	L	E	I	D	P	E	G	E	N	I	G	I	D	D	I	R	T	I	K	D	F	L	N	Y	S	P	E	L	Y	T	R
Template Known Secondary structure													T		S	S								S	S	S	S															T	S				T	T	T							S	S	S		B													T	S			S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
			98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure		.																																																																			.
Query SS confidence		.																																																																			.
Query Sequence		.	L	V	C	I	D	N	I	E	C	I	A	G	D	E	L	W	E	M	A	I	F	D	L	Y	N	R	I	L	E	S	G	K	T	R	L	L	I	T	G	D	R	P	P	R	Q	L	N	L	G	L	P	D	L	A	S	R	L	D	W	G	Q	I	Y	K	L	Q	.	P	L	S	D	E	D	K	L	Q	A	L	Q
Query Conservation		.																																																																			.
Alig confidence		.												.	.															.	.																					.	.	.	.	.	.	.											.
Template Conservation														.	.															.	.																					.	.	.	.	.	.	.
Template Sequence		K	Y	V	I	V	H	D	C	E	R	X	T	.	.	Q	Q	A	A	N	A	F	L	K	A	L	E	E	P	.	.	P	E	Y	A	V	I	V	L	N	T	R	R	W	H	Y	L	L	P	T	I	.	.	.	.	.	.	.	K	S	R	V	F	R	V	V	V	N	V	P	K	E	F	R	D	L	V	K	E	K	I
Template Known Secondary structure							T	T	G	G	G	B		.	.							T						S		.	.		T	T								S		G	G	G	S					.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure														.	.															.	.																					.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.								.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	R	L	R	G	F	E	L	P	E	D	V	G	R	F	L	L	K	R	L	D	R	E	M	R	T	L	F	M	T	L	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	D	L	W	E	E	L	P	L	L	E	R	D	F	K	T	A	L	E	A	Y	K	L	G	A	E	K	L	S	G	L	X	E	S	L
Template Known Secondary structure		T	T						G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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