Job Description P69931 Confidence 98.12% Date Thu Jan 5 12:12:24 GMT 2012 Rank 118 Aligned Residues 164 % Identity 16% Template c2a5yB_ PDB info PDB header:apoptosis Chain: B: PDB Molecule:ced-4; PDBTitle: structure of a ced-4/ced-9 complex Resolution 2.60 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.					.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																			.	.																												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.																												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	G	D	N	S	S	L	L	A	A	L	Q	N	V	L	R	.	.	Q	E	H	S	G	Y	I	Y	L	W	A	R	E	G	A	G	R	S	H	L	L	H	A	A	C	A	E	.	.	.	.	L	S	Q	R	G	D	A	V	G	Y	V	P	L	D	K	R	T	W	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.																												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.																												.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		C	Y	I	R	E	Y	H	V	D	R	V	I	K	K	L	D	E	M	C	D	L	D	S	F	F	L	F	L	H	G	R	A	G	S	G	K	S	V	I	A	S	Q	A	L	S	K	S	D	Q	L	I	G	I	N	Y	D	S	I	V	W	L	K	D	S	G	T	A	P	K	S	T	F	D	L	F	T	D	I	L	L
Template Known Secondary structure		S																		T	T	S	S	S								S	T	T	S	S													S	S	T	B	T	T	T	B	S											S	T	T
Template Predicted Secondary structure
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
																									85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	P	E	V	L	D	G	M	E	H	L	S	L	V	C	I	D	N	I	E	C	I	A	G	D	E	L	W	E	M	A	I	F	D	L	Y	N	R	I	L	E	S	G	K	T	R	L	L	I	T	G	D	R	P	P	R
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		M	L	K	S	E	D	D	L	L	N	F	P	S	V	E	H	V	T	S	V	V	L	K	R	M	I	C	N	A	L	I	D	R	P	N	T	L	F	V	F	D	D	V	.	.	.	.	V	Q	E	E	T	I	R	W	A	Q	E	L	.	.	.	.	.	.	.	.	R	L	R	C	L	V	T	T	R	D	V	E	I
Template Known Secondary structure				T	T	T	S			T	T					T	T															T	T	S	T	T									.	.	.	.												T	.	.	.	.	.	.	.	.	T								S	B	G	G	G
Template Predicted Secondary structure																																													.	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.									.	.	.	.	.	270	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	N	L	G	L	P	D	L	A	S	R	L	D	W	G	Q	I	Y	K	L	Q	P	L	S	D	E	D	K	L	Q	A	L	Q	L	R	A	R	L	R	G	F	E	L	P	E	D	V	G	R	F	L	L	K	R	L	D	R	E	M	R	T	L	F	M	T
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.																													.
Template Conservation					.	.	.	.	.	.	.	.																													.
Template Sequence		S	N	A	.	.	.	.	.	.	.	.	A	S	Q	T	C	E	F	I	E	V	T	S	L	E	I	D	E	C	Y	D	F	L	E	A	Y	G	M	P	.	M	P	E	K	E	E	D	V	L	N	K	T	I	E	L	S	S	G	N	P	A	T	L	M	M	F
Template Known Secondary structure		G	G	G	.	.	.	.	.	.	.	.			S																						T	S			.																	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.																													.
Template SS confidence
		278	.	280									.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions