Job Description P69931 Confidence 98.83% Date Thu Jan 5 12:12:24 GMT 2012 Rank 96 Aligned Residues 192 % Identity 13% Template c1xxiF_ PDB info PDB header:transferase Chain: F: PDB Molecule:dna polymerase iii, delta subunit; PDBTitle: adp bound e. coli clamp loader complex Resolution 4.10 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.							.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.
Query Sequence		L	Q	N	V	L	R	Q	E	H	S	G	Y	I	Y	L	W	A	R	E	G	A	G	R	S	H	L	L	H	A	A	C	A	E	L	S	Q	R	G	D	A	V	G	Y	V	P	L	D	K	R	T	W	F	V	P	E	V	L	D	G	M	.	.	.	.	.	.	E	H	L	S	L	V	C	I	D	N	I	E	C	I
Query Conservation																																																														.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.
Template Conservation
Template Sequence		L	R	A	Q	L	N	E	G	L	R	A	A	Y	L	L	L	G	N	D	P	L	L	L	Q	E	S	Q	D	A	V	R	Q	V	A	A	A	Q	G	F	E	E	H	H	T	F	S	I	D	P	N	T	D	W	N	A	I	F	S	L	C	Q	A	M	S	L	F	A	S	R	Q	T	L	L	L	L	L	P	E	N	G
Template Known Secondary structure												S							S																				T										S	S																	S		S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	D	E	L	W	E	M	A	I	F	D	L	Y	N	R	I	L	E	S	G	K	T	R	L	L	I	T	G	D	R	P	P	R	Q	L	N	L	G	L	P	D	L	A	S	R	L	D	W	G	Q	I	Y	K	L	Q	P	L	S	D	E	D	K	L	Q	A	L	Q	L	R	A	R	L	R	G	F	E	L	P	E
Query Conservation
Alig confidence					.																																											.	.	.
Template Conservation					.																																											.	.	.
Template Sequence		P	N	A	.	A	I	N	E	Q	L	L	T	L	T	G	L	L	H	D	D	L	L	L	I	V	R	G	N	K	L	S	K	A	Q	E	N	A	A	W	F	T	A	L	A	N	R	.	.	.	S	V	Q	V	T	C	Q	T	P	E	Q	A	Q	L	P	R	W	V	A	A	R	A	K	Q	L	N	L	E	L	D	D
Template Known Secondary structure		S		T	.	T										T	T			S	S								S				T	T	T	T	T	S							T	T	T	.	.	.											T	T													T	T
Template Predicted Secondary structure					.																																											.	.	.
Template SS confidence
		89	90	.		.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	G	R	F	L	L	K	R	L	D	R	E	M	R	T	L	F	M	T	L	D	Q	L	D	R	A	S	I	T	A	Q	R	K	L	T	I	P	F	V	K	E	I	L
Query Conservation
Alig confidence																													.	.
Template Conservation																													.	.
Template Sequence		A	A	N	Q	V	L	C	Y	C	Y	E	G	N	L	L	A	L	A	Q	A	L	E	R	L	S	L	L	.	.	W	P	D	G	K	L	T	L	P	R	V	E	Q	A	V
Template Known Secondary structure										S	S	T	T																.	.		T	T
Template Predicted Secondary structure																													.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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