Job Description P69931 Confidence 99.63% Date Thu Jan 5 12:12:24 GMT 2012 Rank 62 Aligned Residues 195 % Identity 21% Template c1qvrB_ PDB info PDB header:chaperone Chain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb Resolution 3.00 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.										40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.																																																		.
Query SS confidence																							.	.	.	.	.	.	.	.	.																																																		.
Query Sequence		F	A	S	F	W	P	G	D	N	S	S	L	L	A	A	L	Q	N	V	L	R	.	.	.	.	.	.	.	.	.	Q	E	H	S	G	Y	I	Y	L	W	A	R	E	G	A	G	R	S	H	L	L	H	A	A	C	A	E	L	S	Q	R	G	D	A	V	G	Y	V	P	L	D	K	R	T	W	F	V	P	E	.
Query Conservation																							.	.	.	.	.	.	.	.	.																																																		.
Alig confidence										.													.	.	.	.	.	.	.	.	.																																																		.
Template Conservation										.
Template Sequence		L	H	K	R	V	V	G	Q	.	D	E	A	I	R	A	V	A	D	A	I	R	R	A	R	A	G	L	K	D	P	N	R	P	I	G	S	F	L	F	L	G	P	T	G	V	G	K	T	E	L	A	K	T	L	A	A	T	L	F	D	T	E	E	A	M	I	R	I	D	M	T	E	Y	M	E	K	H	A	V	S
Template Known Secondary structure				T	T	S		S		.															G	G	G	T	S		S	S	S		S						B	S	S	S	S	S	S														S	S	G	G	G						T	T	T			S	S	G	G	G	G
Template Predicted Secondary structure										.
Template SS confidence
		556	.	.	.	560	.	.	.		.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.
							89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.										.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																				.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																				.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	V	L	D	G	M	E	H	L	S	L	V	C	I	D	N	I	E	C	I	A	G	D	E	L	W	E	M	A	I	F	D	L	Y	N	R	.	.	.	.	.	.	.	.	.	I	L	E	S	G	K	T	R	L	L	I	T	G	D	R	P	P	R	Q	L	N	L	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.																																				.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																					.	.														.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.	.	.	.
Template Conservation																											.	.
Template Sequence		R	L	Q	L	T	E	A	V	R	R	R	P	Y	S	V	I	L	F	D	E	I	E	K	A	H	.	.	P	D	V	F	N	I	L	L	Q	I	L	D	D	G	R	L	T	D	S	H	G	R	T	V	D	F	R	N	T	V	I	I	L	T	S	N	L	G	S	P	L	I	L	E	G	L	Q	K	G	W	P	Y	E
Template Known Secondary structure		G											S	S						S	S	G	G	G	S		.	.												T	T	T					S	S	S						T	T									T	T										T	T
Template Predicted Secondary structure																											.	.
Template SS confidence
		635	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.			660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.
															146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.										.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.				.	.	.	200
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.																			.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.																			.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	P	D	L	A	S	R	L	D	W	G	Q	I	Y	K	L	Q	P	L	S	D	E	D	K	L	Q	A	L	Q	L	R	A	.	.	.	.	.	.	.	.	.	R	L	R	G	F	E	L	P	E	D	V	G	R	F	L	L	K	R	.	.	.	L	D	R	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.																			.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.												.	.																					.	.	.	.	.	.	.	.	.																			.	.	.
Template Conservation																										.	.
Template Sequence		R	I	R	D	E	V	F	K	V	L	Q	Q	H	F	R	P	E	F	L	N	R	L	D	E	.	.	I	V	V	F	R	P	L	T	K	E	Q	I	R	Q	I	V	E	I	Q	L	S	Y	L	R	A	R	L	A	E	K	R	I	S	L	E	L	T	E	A	A	K	D	F	L	A	E	R	G	Y	D	P	V	F	G
Template Known Secondary structure												T	T	T	S							T		S	B	.	.			B																										T	T	T																			B	T	T	T	B
Template Predicted Secondary structure																										.	.
Template SS confidence
		727	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750			.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	R	T	L	F	M	T	L	D	Q	L	D	R	A	S	I	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	P	L	R	R	V	I	Q	R	E	L	E	T	P	L	A	Q
Template Known Secondary structure		T	S										T
Template Predicted Secondary structure
Template SS confidence
		805	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions