Job Description P69931 Confidence 97.79% Date Thu Jan 5 12:12:24 GMT 2012 Rank 147 Aligned Residues 142 % Identity 10% Template c1ly1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:polynucleotide kinase; PDBTitle: structure and mechanism of t4 polynucleotide kinase Resolution 2.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	Y	I	Y	L	W	A	R	E	G	A	G	R	S	H	L	L	H	A	A	C	A	E	L	S	Q	R	G	D	A	V	G	Y	V	P	L	D	K	R	T	W	F	V	P	E	V	L	D	G	M	E	H	L	S	L	V	C	I	D	N	I	E	C	I	A	G	D	E	L	W	E	M	A	I	F	D	L	Y	N
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.																													.
Template Conservation																																	.	.	.	.	.	.	.	.																													.
Template Sequence		K	K	I	I	L	T	I	G	C	P	G	S	G	K	S	T	W	A	R	E	F	I	A	K	N	P	G	F	Y	N	I	.	.	.	.	.	.	.	.	N	R	D	D	Y	R	Q	S	I	M	A	H	E	E	R	D	E	Y	K	Y	T	K	K	K	E	G	I	V	.	T	G	M	Q	F	D	T	A	K	S	I	L
Template Known Secondary structure											T	T	S	S												S	T	T					.	.	.	.	.	.	.	.										T	T	S			G	G	G												.
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.																													.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.									.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	E	S	G	K	T	R	L	L	I	T	G	D	R	P	P	R	Q	L	N	L	G	L	P	D	L	A	S	R	L	D	W	G	Q	I	Y	K	L	Q	P	L	S	D	E	D	K	L	Q	A	L	Q	L	R	A	R	L	R	G	F	E	L	P	E	D	V	G	R	F	L	L	K	R	L
Query Conservation
Alig confidence																																													.	.	.	.
Template Conservation																																													.	.	.	.
Template Sequence		Y	G	G	D	S	V	K	G	V	I	I	S	D	T	N	L	N	P	E	R	R	L	A	W	E	T	F	A	K	E	Y	G	W	K	V	E	H	K	V	F	D	V	P	.	.	.	.	W	T	E	L	V	K	R	N	S	K	R	G	T	K	A	V	P	I	D	V	L	R	S	M	Y	K	S	M
Template Known Secondary structure		T	S		S	S								S				S															T												.	.	.	.									T	T		G	G	G
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions