Job Description P69931 Confidence 99.82% Date Thu Jan 5 12:12:24 GMT 2012 Rank 30 Aligned Residues 214 % Identity 17% Template c1iy2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent metalloprotease ftsh; PDBTitle: crystal structure of the ftsh atpase domain from thermus2 thermophilus Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.													40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	L	P	D	D	E	T	F	A	S	F	W	P	G	D	N	S	S	L	L	A	A	L	Q	N	V	L	R	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	H	S	G	Y	I	Y	L	W	A	R	E	G	A	G	R	S	H	L	L	H	A	A	C	A	E	L	S	Q	R	G	D	A	V	G	Y	V	P
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.
Template Sequence		L	T	E	A	P	K	V	T	F	K	D	V	A	G	.	.	A	E	E	A	K	E	E	L	K	E	I	V	E	F	L	K	N	P	S	R	F	H	E	M	G	A	R	I	P	K	G	V	L	L	V	G	P	P	G	V	G	K	T	H	L	A	R	A	V	A	G	E	A	R	V	P	F	I	T	A	S	G	S	D
Template Known Secondary structure		B								G	G	G	S	S	S	.	.																								T	T													T	T	S	S												T	T
Template Predicted Secondary structure																.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.					.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.																							.	.	.	.
Query SS confidence														.	.	.	.	.	.	.																							.	.	.	.
Query Sequence		L	D	K	R	T	W	F	V	P	E	V	L	.	.	.	.	.	.	.	D	G	M	E	H	L	S	L	V	C	I	D	N	I	E	C	I	A	G	D	E	L	.	.	.	.	W	E	M	A	I	F	D	L	Y	N	R	I	L	E	S	G	K	T	R	L	L	I	T	G	D	R	P	P	R	Q	L	N	L	G	L
Query Conservation														.	.	.	.	.	.	.																							.	.	.	.
Alig confidence														.	.	.	.	.	.	.																							.	.	.	.																																			.
Template Conservation																																																																																	.
Template Sequence		F	V	E	M	F	V	G	V	G	A	A	R	V	R	D	L	F	E	T	A	K	R	H	A	P	C	I	V	F	I	D	E	I	D	A	V	G	R	K	N	D	E	R	E	Q	T	L	N	Q	L	L	V	E	M	D	G	F	E	K	D	T	A	I	V	V	M	A	A	T	N	R	P	D	I	L	D	P	A	L	.
Template Known Secondary structure					S	T	T	T															T	S		S							T																							T	T			T	T										S		T	T	S	S					.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.
Predicted Secondary structure																																																						.																					.
Query SS confidence																																																						.																					.
Query Sequence		P	D	L	A	S	R	L	D	W	G	Q	I	Y	K	L	Q	P	L	S	D	E	D	K	L	Q	A	L	Q	L	R	A	R	L	R	G	F	E	L	P	E	D	V	G	R	F	L	L	K	R	L	D	R	.	E	M	R	T	L	F	M	T	L	D	Q	L	D	R	A	S	I	T	A	Q	.	R	K	L	T	I	P
Query Conservation																																																						.																					.
Alig confidence		.	.	.																																							.											.																					.
Template Conservation		.	.	.																																							.
Template Sequence		.	.	.	L	R	P	G	R	F	D	R	Q	I	A	I	D	A	P	D	V	K	G	R	E	Q	I	L	R	I	H	A	R	G	K	P	L	A	E	D	V	D	.	L	A	L	L	A	K	R	T	P	G	F	V	G	A	D	L	E	N	L	L	N	E	A	A	L	L	A	A	R	E	G	R	R	K	I	T	M	K
Template Known Secondary structure		.	.	.		S	T	T	S	S																							T	T	S		B		T	T			.							T		T	T																				T	T			S	B
Template Predicted Secondary structure		.	.	.																																							.
Template SS confidence
					312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
		226	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	K	E	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	E	E	A	A
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		388	.	390	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions