Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF09
Confidence68.40%DateThu Jan 5 11:30:42 GMT 2012
Rank484Aligned Residues44
% Identity7%Templated1z91a1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.........60. ........70.........80.........90
Predicted Secondary structure 


.







Query SS confidence 














.




























Query Sequence  ASQPGTHQKIIDMAM. NGVGCRATARIMGVGLNTIFRHLKNSGRS
Query Conservation                 .   
 
 


 



  

 


      
Alig confidence 














.




























Template Conservation 


  
  

  
      
  


         

  
  
   
Template Sequence  NITYPQYLALLLLWEHETLTVKKMGEQLYLDSGTLTPMLKRMEQQ
Template Known Secondary structure 


STTT

Template Predicted Secondary structure 













Template SS confidence 












































   37..40.........50.........60.........70.........80.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions