Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF09
Confidence92.19%DateThu Jan 5 11:30:42 GMT 2012
Rank93Aligned Residues38
% Identity16%Templatec3e7lD_
PDB info PDB header:transcription regulatorChain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.........70.........80........
Predicted Secondary structure 






Query SS confidence 





































Query Sequence  GTHQKIIDMAMNGVGCRATARIMGVGLNTIFRHLKNSG
Query Conservation                
 
 


 



  

 


    
Alig confidence 





































Template Conservation 

  
  

    

   

  


 
 

  



 
Template Sequence  EKIFIEEKLREYDYDLKRTAEEIGIDLSNLYRKIKSLN
Template Known Secondary structure  TTT
TT

TT
Template Predicted Secondary structure 






Template SS confidence 





































   36...40.........50.........60.........70...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions