Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF09
Confidence87.62%DateThu Jan 5 11:30:42 GMT 2012
Rank162Aligned Residues40
% Identity20%Templatec3cuoB_
PDB info PDB header:transcription regulatorChain: B: PDB Molecule:uncharacterized hth-type transcriptional regulator ygav; PDBTitle: crystal structure of the predicted dna-binding transcriptional2 regulator from e. coli
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.. .......70.........80.........90
Predicted Secondary structure 
..






Query SS confidence 











. .



























Query Sequence  GTHQKIIDMAMN. . GVGCRATARIMGVGLNTIFRHLKNSGRS
Query Conservation              ..  
 
 


 



  

 


      
Alig confidence 











..



























Template Conservation    
  

  
         


  
 

  


 

  
   
Template Sequence  PKRLLILCMLSGSPGTSAGELTRITGLSASATSQHLARMRDE
Template Known Secondary structure  TT
S



Template Predicted Secondary structure 








Template SS confidence 









































   24.....30.........40.........50.........60.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions